Capsella rubella (pink shepherd's-purse): 17895881
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Entry
17895881 CDS
T02984
Name
(RefSeq) DNA polymerase zeta catalytic subunit isoform X1
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
17895881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crb03400
]
17895881
Enzymes [BR:
crb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
17895881
DNA repair and recombination proteins [BR:
crb03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
17895881
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
POL3_N
REV3_N
zf-C4pol
DNA_pol_B_exo1
DZR_2
divDNApol
DZR
Motif
Other DBs
NCBI-GeneID:
17895881
NCBI-ProteinID:
XP_023643164
LinkDB
All DBs
Position
Unknown
AA seq
1926 aa
AA seq
DB search
MDESQSGSNVFSLRIVTIDYYMASPIPGYDICYSSFQGGEVNEVPVIRIYGSTPAGQKTC
LHIHRALPYLYIPFSEIPLEQRKGVDGSTLAVSLELEKALKLKGTAASKRQHVHDCEIVR
AKNFYGFHSTEEAFVKIYLYHPPDVARAASLLLAGAVLGKSLQPYESHIPFILQFLVDYN
LYGMGHVHISKMKFRSPVPRHFLPRRFDLDDCAGKKIDKVAMTKANSSAAASVRFPVWSL
LTIPGQWMWNLSEESDTPLSQSQHRQYYRRQSLCELEGDATISGKFLKRNLLFFCFMYEL
TFELVFSLTDILNQQFKMYNSLSQAQSDTNMVQSLVAIWEEEYERTGVHDAPIPPDPGKP
SAAVVLKTMSDYVGFENMLKEMRNEVNLSPSEMNPTVVSLAGPDMDAKPEITDLQVLNHT
VGTHSIFSASEQLSPLGDKSEEASMENDEYIKTPTDRDTPAEIQDSEALSLFKWFASSQA
AEDINSDDEILRETILSPLLPLASINKALEMASTDYVSQSQKECQDILDSQEDLPDFGSS
TKRALPSNPDSQNLLSSSDKPSLETEDIADISTSNGESENSFQRYRKSDKGDLHMRSVME
NKNCSFSKSNKPSNSVWGPLPFTLTKNLQKDFDGTKDSDKIGLTKISSDPVNELTDNYNV
PVKEHQADVCNTIDRNDLAGCSLRDLMRKKRLCHGDSPVSQHMKFRKVLPQTRDYRHGKQ
KECALRAEAKKQGPALSAEFSEFDYGNAPPTLSPIDAGNCECNISTQSSELHSVDRCPAK
ETAGQNSDEVSKNISSTTVPLGKDPQTVESGTLVSSNKLGKIKLDVIQKSGGEQKSSANG
IDETRRLICLTLSKKPPSPDCLGAGLQDSAHSHEIPAQFLHARGKQHVGREWNTKEIPFF
PRKDIEFDKDEKKHFFEGPSLGIPLHHLNDGSNLYLLTPAFSPPPVDSVLQWISNEKGSG
DYIFDSENQLLGDEHIDRGASCTDLASASNVMSVSEHIKQHNNIFVNSESNTCTESELDL
KRKENSLNLQTSVSQEMSQISGPDGKSGPTPLSQIGFQDPASMGAGQQLTVLSIEVHAES
RGDLRPDPRFDSVNVIALVVQNDDNFANEVFVLLYSSDSIDQRNVDGLSGCKLSVFVEER
QLFSYFIETLCKWDPDILLGWDIQGGSIGFLAERAAQLGIRFLNKISRTPSPTTANDSDN
KRNLGNNLPPDPLVADPAQVEEVVIEDEWGRTHASGVHVGGRIVLNAWRLIRGEVKLNMY
TVEAVSEAVLRQKIPLIPFKVLTEWFSSGPAGARYRCIEYFIRRANLNLEILSQLDMINR
TSELARVFGIEFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNQQVASQPAMECVPLVM
EPESAFYDDPVIVLDFQSLYPSMIIAYNLCFSTCLGKLAHLKMNTLGVSSYSLDLDVIQD
LNQIMQTPNSVMYVPPEVRRGILPRLLEEILSTRIMVKKAMKKLTPSEAVLHRIFNARQL
ALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLENAISFVTANDKWNARVVYGDT
DSMFVLLKGRTVKEAFLVGQEIASAITEMNPHPVTLKMEKVYHPCFLLTKKRYVGYSYES
PDQNEPIFDAKGIETVRRDTCEAVAKTMEQSLRLYFEKKNISKVKSYLYRQWKRILSGRV
SLQDFVFAKEVRLGTYSTRDSSLLPPAAIVATKSMRADPRTEPRYAERVPYVVIHGEPGA
RLVDMVVDPLVLLDIDTPYRLNDLYYINKQIIPALQRVFGLVGADLNQWFLEMPRATRIS
LGQRPLNSKNSHKTRIYYFYLSKHCILCGEVVQESAQLCNRCLKNKSAATATMVWKTSKL
EREMQHLATICRHCGGGDWVVQSGVKCNSLACSVFYERRKVQKELRGLASIATESDLYPK
CMAEWF
NT seq
5781 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtctcagtccggttctaatgttttcagtttacggattgttacgatcgattat
tacatggcttctccgatccctggttacgatatttgctacagtagctttcaaggtggtgag
gtaaacgaagtccctgttataaggatatatggctctacacctgctggtcagaagacttgc
ttgcacattcatcgtgctttaccgtatctctatattccattctctgagattccacttgag
cagcgtaaaggagttgatggaagtacacttgctgtatcccttgagttagagaaggcttta
aagcttaagggaacagctgcttcaaaaaggcaacatgtccatgattgtgagattgttaga
gccaagaatttttatgggttccattcaacagaggaggcctttgtgaagatttatctctac
catccacccgatgtggctcgtgctgccagtcttcttctggcaggtgctgttcttggtaaa
agtttgcagccttacgagtctcatattccctttattctccagtttctggttgattataat
ttatatggaatgggtcatgtgcatatatcaaagatgaagttccgtagcccagtgcctcgc
catttccttccaaggagatttgatttggatgattgtgcagggaaaaagattgacaaagtg
gctatgacaaaggcaaattcaagtgctgctgcaagcgtccgttttcctgtttggagcttg
ttaacaatcccaggtcaatggatgtggaatctctctgaagaatctgatacaccgttgagc
cagagccagcataggcagtattatagacgtcagagtctctgtgaacttgagggagatgct
actattagtggtaagttcctgaaacgaaatttactttttttttgtttcatgtatgaactg
acctttgaactagttttttctcttacagatattctcaatcaacagtttaaaatgtacaac
tccctttcacaagctcagtctgatacgaacatggttcagtcgcttgtggcaatttgggag
gaggagtatgaaaggactggcgtgcatgatgcacctatacctcctgaccccggcaaaccc
tctgcagctgttgtgttgaagactatgtcagattatgttgggtttgagaacatgcttaaa
gaaatgcgtaatgaagttaatttgtctccatctgagatgaatcctactgtagtatcttta
gccggtccagatatggatgccaaacctgaaattactgatctgcaggttttgaatcatacg
gttggtacacacagtatcttttctgcatcagaacagctttctcctcttggtgacaagagt
gaagaagcatcaatggaaaatgatgaatatattaaaacacccacggacagagatacacct
gctgaaatacaagattctgaagccttgagtctctttaagtggtttgcctcatcccaggct
gcagaggacataaactctgatgatgaaattctccgggaaactatccttagtcctcttttg
cctttagcgtccataaacaaggctcttgaaatggctagtacagattatgtgagccaatcc
caaaaggaatgccaagatattcttgattctcaggaggatctaccagactttgggagttcg
acaaaaagagctttaccaagtaatcctgacagccagaatcttttatcttcatcagacaaa
ccatctcttgaaacagaagatattgcagatatctccacttctaatggagaaagcgaaaat
tcatttcagagatacagaaagagtgataagggtgatttacatatgaggagcgtaatggag
aataagaactgcagtttctctaagagcaacaagcctagcaactcagtatggggaccttta
ccttttacactgaccaaaaatcttcagaaggacttcgatggtacaaaagatagtgataaa
attggtctaacaaagattagttcagaccccgtgaatgagttgacagataattataatgtt
ccagtcaaagaacatcaagcagatgtttgtaacacgattgacagaaacgacttggctgga
tgttctctgcgggatttgatgagaaaaaagcggttatgccatggagactcgcctgtttca
caacatatgaagtttaggaaggttctaccacagaccagagattaccgacacggaaaacaa
aaggagtgcgctttgagagctgaggccaaaaaacaaggtcctgctctttctgcagaattt
agtgaatttgattatggcaatgctcctccaactttatctcctatagatgctggaaattgc
gagtgtaatatatccactcagtcatctgaacttcattctgttgatagatgtccggctaaa
gagacagcaggtcaaaacagtgatgaagtttcaaagaatatttcatccaccactgttcca
cttggtaaggatccacaaacagtggaatcaggaacattggtttctagcaataaacttggt
aagattaaattagatgttatccaaaaatctgggggagagcaaaagtcatctgccaatgga
attgatgagacgagaagattaatatgcctaaccttaagcaagaagcctccttctcccgat
tgcctaggtgctggactgcaggattctgcacattctcatgaaattcccgctcaatttctt
catgccaggggaaaacagcatgtcggacgtgagtggaatactaaggagattccatttttt
ccccggaaggacatcgaattcgacaaggatgagaagaaacactttttcgaaggaccttcc
cttggcattcccttgcaccatctcaatgacggctcaaacctctacttactgacccctgct
ttttcaccccctcctgtggattctgttttacaatggatatcgaatgaaaaaggttcagga
gactatatatttgattcagaaaatcaactattaggagatgagcatattgatcgtggggcg
agttgtactgatcttgcttctgcatctaatgtgatgtctgtgtctgagcacataaagcag
cataataacatttttgtgaattcagaatcaaatacttgtacagagtctgagttagatctg
aaacgaaaagaaaatagtcttaacttgcagactagtgtttcccaagagatgtctcagatt
tcaggtcctgatgggaaatcagggcccactcccttaagtcaaattggattccaagatcct
gcgagcatgggggctgggcaacagcttacagtattgagtattgaggttcatgcagagtct
agaggggacctgcgacctgatccacgatttgattctgtcaatgtcatagctcttgtcgtg
cagaatgatgataattttgcaaatgaagtatttgtgcttttatatagttcagatagcatt
gatcagagaaatgttgatggcctatctggatgcaagttgtctgtctttgttgaagagagg
caactattcagttattttattgagactttatgtaaatgggatccagatattctactgggc
tgggatatacagggcggatccattggttttttagctgaaagggctgcacagcttggtata
agatttctcaataagatatctaggacgccatctcccaccacggccaatgattcagataat
aagagaaaccttggtaataatctgccgccagatccgttggtagctgatcctgctcaagta
gaagaagtggtaattgaggatgagtggggccgtacacatgctagtggtgttcatgttgga
ggtcgaattgttctcaatgcatggcgtttgattcgcggggaagttaaactcaacatgtac
acggttgaagctgtgtcagaggctgttctgaggcaaaagattccattaataccctttaaa
gtattgacagaatggttttcaagtggtcctgccggtgcaagatatcgatgcatagaatat
tttattcgccgagctaatttgaacctggagattctgagccaacttgacatgataaatcgt
acgtcagaacttgcacgtgtttttggcatagaatttttctcagttctctcccgaggttcc
caatacagagtggaatccatgcttttaagattagcacatactcaaaattatcttgctata
tctccaggaaaccaacaggttgcttctcagccagctatggaatgtgtacctctcgtgatg
gaaccagagtctgccttctacgatgatcctgttattgtgttggattttcaatctctttac
ccgtcaatgattatagcatataatttgtgcttctctacatgtctcggaaaacttgcacat
ttgaagatgaacactcttggggtcagctcatactctctagaccttgatgttattcaggat
ttaaatcagatcatgcagacaccaaacagtgtgatgtacgtgccaccagaggtgcgtaga
ggaatcttaccaaggctgctagaggaaattctatctacaagaataatggtgaaaaaagca
atgaaaaagttgactccttcagaagcagttcttcaccggatatttaatgcgaggcagctt
gctttaaagctgatagcaaatgtgacttatggctatactgctgctggcttcagtggtcga
atgccttgtgcagagctggcagatagtattgttcagtgtggtcgtagcacacttgagaac
gctatttcgttcgtcactgccaatgataagtggaacgctagagttgtgtatggtgacact
gatagtatgtttgtcctcctcaaaggaagaactgtaaaagaagcttttttagttggacaa
gagattgcgtctgcaataactgaaatgaacccacacccagtcactttaaagatggagaaa
gtctatcacccttgtttccttcttacgaagaagcgctatgttgggtacagttatgaaagt
cccgatcagaatgagcctatatttgatgcaaaaggtattgaaactgtccgaagagacact
tgtgaagctgttgcaaaaactatggagcaatcgttgagactctattttgaaaagaagaac
atctctaaggttaagtcgtacttgtatagacaatggaagcggatactatcagggagagtg
tctctccaagattttgtctttgcaaaagaagttcggttggggacttatagcacaagagac
tcttcactccttcctccagcagctattgtggcaaccaaatcaatgagagcagaccctcgg
acagagccacgctatgctgaacgagtgccttatgttgtgatccatggggagccaggggct
cgacttgttgatatggtggtggacccactggttcttttagacatcgatacaccctacaga
ttgaatgacttatactacatcaacaaacaaattataccagctttgcaaagggtctttgga
cttgtgggtgcagacttaaaccagtggtttttggagatgccccgtgccaccagaatttcc
cttggtcaacgtcctttaaactctaaaaactcgcacaaaactagaatatattatttttat
ctctcgaaacattgcatcttgtgtggggaagttgttcaggaatctgctcagctatgcaac
cggtgcctcaaaaataaaagtgctgctactgcaaccatggtttggaagacttcaaaattg
gagagagagatgcaacacctagccacgatatgcagacactgtggtgggggagactgggtg
gtgcaatccggagtgaaatgcaattccctcgcttgctcagtcttttacgagagacggaaa
gttcagaaagagcttcgtggcctcgcctccattgctacagagagtgacctttaccctaaa
tgcatggctgagtggttctaa
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integrated database retrieval system
