Capsella rubella (pink shepherd's-purse): 17896018
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Entry
17896018 CDS
T02984
Name
(RefSeq) vacuolar protein sorting-associated protein 52 A isoform X2
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17896018
Membrane trafficking [BR:
crb04131
]
Protein recycling
Others
EARP complex
17896018
Endosome - Golgi transport
Tethering complex
GARP complex
17896018
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
SPG48
PWI
GnsAB_toxin
Motif
Other DBs
NCBI-GeneID:
17896018
NCBI-ProteinID:
XP_006300625
UniProt:
R0IAF1
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MSDISINALGQAMGDFSNHEKNGFDLGAFVGDLAFEEDSGSEDISLEGLQQELEECASDE
VVSNILSSGAKLRDYAKGVENNLRKVELDSIEDYIKESDNLVSLHDQIRDCDSILSQMET
LLSGFQEEIGSISSDIKILQEKSMDMGLRLKNRRVAESKLAKFVEDIIVPPKMIDVIVDG
EVNEEYMKTLETLSKKLKFVEADQAVKSSKALKDVEPELEKLRQKAISKVYDFIVQKLIA
LRKPKTNIQILQQSVLLKYKYIISFLKEHGKEVFMDVRAAYVDTMNKVLSAHFRAYIQAL
EKLQLDIATAYDLIGVETRTTGLFSRAREPLKNRSAVFALGERIKIIKEIDQPALIPHIA
EASSIKYPYEVLFRSLHKLLMDTATSEYIFCDDFFGEESIFYEIFAGPFSVIDEHFNPVL
SNCFDAIGLMLMIRIIHHHQLIMSRRGIPCLDSYLDKVNISLWPRFKMVFDSHLSSLRDA
NIKTLWEDDVHPHYVMRRYAEFTASFIHLNVEYGDGQLDINLERLRMAVDGLVLKLAKLF
PKPKQQIVFLINNYDMTIAVLKEAGPDGGKIQMHFEELLKSNTSLFVEELLVEHFSDLIK
FVKNRASEDSSSNPERAITIAEVEPLVRDFGSRWKTAIELMDKDIITSFSNFLCGMDILR
AALTQLLLYYTRLTDCIKKIDGGSALNRDLVSIQSIMYEIRKYSKTF
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacatttccattaacgcattgggccaagcaatgggtgactttagtaatcatgag
aaaaatggatttgatttaggagcatttgtcggagacttggcttttgaagaagattcaggc
agtgaggatatatcattggaagggcttcaacaagaactagaagaatgtgcaagtgatgag
gttgtatccaatatactatccagtggtgccaaacttagagactatgcaaaaggggtagaa
aacaatctccggaaggttgaattggattcaattgaggattacattaaagaaagtgataat
ctagtttcacttcacgatcagattcgtgactgtgacagcatcctgtcacaaatggaaact
ctcctcagtggatttcaggaagagattggttctataagttcagacataaagattcttcaa
gaaaagtcaatggacatgggtttgcgattgaaaaaccgcagggtggctgagtcaaagcta
gcaaaatttgttgaagacattatagtgccaccaaagatgatcgatgtaattgttgatgga
gaggtgaatgaagagtatatgaaaacgcttgaaactctgagtaagaagctgaaatttgta
gaagcagatcaagcagttaaaagctcaaaagctttaaaagacgtagagcctgagctcgaa
aagcttcggcaaaaagctatctccaaggtgtatgattttattgtccagaagcttatagcc
cttaggaaacccaaaacaaacattcaaattcttcaacagagtgtgttattaaagtacaag
tatattatctccttcctcaaagaacatggaaaagaagtgtttatggatgtccgtgctgca
tacgttgataccatgaacaaggtgttaagtgcacattttcgtgcttatattcaagccctt
gagaaactacagctagatatagccacagcatatgacttgattggggtggagactagaacc
accggcctcttctccagagcaagggagccactaaagaaccgttctgccgtttttgctttg
ggtgagaggataaaaattataaaggaaattgatcaacctgctttgatcccgcacatagcc
gaagccagctcgattaaatacccttatgaagtgctcttcaggagcttgcacaagctactt
atggatacagctacttctgagtatatattttgtgatgatttctttggtgaagagtccata
ttctatgaaatctttgcaggtccattttctgtcattgatgagcacttcaatcctgttctt
tcaaactgttttgatgctatcggcctgatgcttatgattcgcataatacaccaccaccag
cttatcatgtctcgtcgagggattccatgcttggattcatatctagacaaggttaatatt
tctttgtggccacgtttcaagatggtatttgactcacacctcagcagtctgcgagatgca
aacattaagacattatgggaagatgatgttcatcctcactatgtcatgagacgttatgct
gaattcacagcttcatttattcacctgaatgttgaatatggagatgggcagcttgatata
aatctggagcggttaagaatggctgttgatggcttggttctcaaacttgcaaagttgttc
ccaaagccaaagcagcaaattgtgtttctcataaacaactacgatatgacaattgctgtg
ctgaaggaagctggaccagacggtgggaaaattcaaatgcattttgaggaattgctaaag
agcaacacttcgttatttgtggaagaactgctggtggaacatttcagtgatttgataaaa
tttgtgaaaaatcgagcctctgaggattcaagctcaaatccagagagggccataacaatt
gctgaagtagagccactggtgagggactttgggagcagatggaagacagcgattgagttg
atggacaaagatatcataacatcgttcagtaacttcttgtgcggtatggatattctgaga
gctgcattgacacagctattgctctattacacaagactcacagactgcatcaagaagata
gatggtggatctgctctgaacagggatcttgtctccatccaatctatcatgtacgagatc
aggaaatactcaaagactttctga
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