KEGG   Capsella rubella (pink shepherd's-purse): 17896045
Entry
17896045          CDS       T02984                                 
Name
(RefSeq) splicing factor U2af large subunit B isoform X2
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    17896045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:crb03041]
    17896045
Spliceosome [BR:crb03041]
 Complex A
  U2 snRNP components
   U2 related factors
    17896045
 Complex B
    17896045
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 17896045
NCBI-ProteinID: XP_006302026
UniProt: R0HYG2
LinkDB
Position
Unknown
AA seq 603 aa
MMSYEGNGDGVAVSTATNNNNDDYIARESSPFQQSLGGEDGHEDSKSRESHDPEKDYSRS
KEKDKENQDRDKDSEREKSRDRDREKSRDRDREKSRDRDREKSKDRERDRHHRDRHRDRS
RERSEKRERERDDLDDDHHHRRSRDRDSRRRSRDRDREERHRRRSRSRSRSRSERRSEHR
HRSEHRSRSRSRSRSKSKRVSGFDMAPPASAMLAATAVATAGQVPSVPTAATIPGMFPNM
FPMVPGQQLGTLPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMSAIGGNT
AGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAAT
LGPSQPNPSLNLAAVGLSSGSTGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFNL
VKDRETGNSKGYAFCVYQDPSVTDIACAALNGIKMGDKTLTVRRAIQGAVQPKPEQEEIL
LHAQQQIAFQRLMLQPGGTPTKIVCLTQVVTADDLRDDEEYADIMEDMRQEGGKFGNLVN
VVIPRPNPDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVYYSENKYAQGD
YED
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgatgagttacgaaggtaacggagatggcgtcgctgtctccaccgcaaccaacaacaac
aacgatgactacatagctcgggagagttcgccttttcagcagtcccttggtggggaggat
ggtcacgaagactccaagtctcgagaatctcatgatcctgaaaaggattattcaagaagc
aaggagaaagacaaggaaaatcaagacagagacaaagatagtgaaagggaaaagagcaga
gacagagacagggagaaaagcagagatagagatagggagaaaagcagagatagagatagg
gagaaaagtaaggatagggaacgagaccgccatcatagagatcgtcatagggaccgtagc
agagaacgtagtgagaaaagagaacgtgagagagatgatttggatgatgatcatcatcat
cgcagaagtcgagaccgtgacagcaggaggaggtctcgcgatcgagacagagaagagagg
cacaggcggcggtcacgctctcggtctaggagccgctccgagcgtaggtcagaacatagg
cataggtctgaacatagatcacgttctcgctcacggtcacggtcaaagagcaagagggta
agtggatttgatatggcgccccctgcttctgcaatgttagctgctactgctgttgctacc
gcaggccaggttcctagtgtgcctactgctgctactattccagggatgttccccaacatg
ttcccgatggtccctggtcagcaactgggcacactacctgtaatgccagttcaggcaatg
actcagcaggcaactaggcatgctcggagagtctatgttggtgggcttccaccaactgca
aatgaacagtcggtggctacgttctttagccaagtgatgtcggccattgggggaaacact
gctgggccaggtgatgcggtggtcaatgtttatataaaccatgaaaagaagtttgctttt
gtagagatgagatctgttgaggaggctagtaacgcaatggcattagacggcattatacta
gagggagttcctgtaaaggttaggaggccaactgactataatccgtcccttgctgcaact
cttggtccgagccagcctaatcccagcctgaacttggcggctgttggattgtcttcgggg
tctactggtgggcttgagggtcctgaccgcatttttgtgggcgggcttccttattacttc
acagaggcacagatcagggagcttttagagtcttttggtcccctaagaggtttcaacttg
gtcaaagacagggaaactggaaattcaaagggatatgcgttctgtgtttaccaagatcct
tcagtaacagatattgcatgtgccgctctaaatgggattaagatgggtgataagacactt
acagttaggcgtgcaatccagggtgcagttcaacctaaacccgagcaagaagaaatctta
cttcatgctcaacaacagattgcttttcagaggcttatgttacaaccaggaggcactccc
accaagattgtctgtttgactcaggtggttacagctgatgatcttagagacgatgaagaa
tatgcagacattatggaggacatgagacaagaaggtggaaaattcggtaacttggtgaat
gttgtgattccgaggcccaatccagatcatgatccaacaccaggagtcggaaaggttttc
ttagaatatgcggatgtggatggctcatcaaaggctagatcgggaatgaacggaagaaaa
tttggaggaaaccaagtggtggctgtgtattactctgaaaacaagtatgcgcaaggcgac
tacgaagactaa

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