Capsella rubella (pink shepherd's-purse): 17896055
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Entry
17896055 CDS
T02984
Name
(RefSeq) protein RAE1
KO
K14298
mRNA export factor
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
17896055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17896055
03036 Chromosome and associated proteins [BR:
crb03036
]
17896055
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
17896055
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
17896055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
EIF3I
ANAPC4_WD40
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_Nup120_160
Beta-prop_BBS7
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
17896055
NCBI-ProteinID:
XP_006302480
UniProt:
R0IF52
LinkDB
All DBs
Position
Unknown
AA seq
349 aa
AA seq
DB search
MATFGAAANANSNPNKSYEVTPSPGDSISSLSFSPRADILVATSWDNQVRCWEISRSGAS
IASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIVAM
AWIPGMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDKCYALSVKHPLMVVGTADRNLIVF
NLQNPQTEFKRIQSPLKYQTRCVTAFPDQQGFLVGSIEGRVGVHHLDDSQQSKNFTFKCH
RDGNDIYSVNSLNFHPVHGTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPIPCSSFNHDG
SIYAYASCYDWSKGAENHNPATAKSSIFLHLPQENEVKAKPRVGATGRK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggctacttttggtgcggccgctaacgcaaacagtaaccctaacaaatcgtacgaggtt
actccgtcaccaggggactctatttcgagcttaagtttcagtccaagagcagatatactt
gtggccacttcatgggacaatcaggtgaggtgttgggaaatatcccgtagtggagcctct
atagccagtgctccgaaagcatcaatatcgcatgatcagccggttctctgttctgcttgg
aaagatgatggaaccacagtcttcagtggtggatgtgataagcaagctaaaatgtggccc
ttgttgtccggtggtcaacctgtaactgtagctatgcacgaaggtcctatcgtagctatg
gcttggatcccaggaatgaaccttcttgcaactggaagttgggataaaactttgaaatat
tgggacacaagacagccaaatcccgtgcatacccaacagcttccagataaatgttatgca
ttgtctgtgaagcatcctctgatggttgtcggaactgctgatagaaatctgatagtcttc
aacttgcaaaatcctcagactgagttcaagagaatccaatccccactaaagtaccagacg
aggtgtgttactgccttccctgatcagcaaggatttttggttggttcaattgaagggcgg
gttggtgtccatcatctggatgattctcaacagagcaaaaacttcacattcaaatgccac
agagatgggaacgatatatattctgtgaactctctgaatttccacccggttcatgggact
tttgccactgcgggctctgatggtgctttcaacttctgggataaggatagtaaacaaaga
ctcaaggccatgtcgaggtgcagtcagccaattccttgcagttcgttcaaccatgatggc
tcgatatatgcatatgcgtcttgctatgactggagcaaaggtgcagaaaatcacaacccg
gcaactgcaaaaagcagcattttcttgcacctgccacaggagaacgaggtgaaggcgaag
ccaagagttggagcaaccggcagaaaatga
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integrated database retrieval system
