KEGG   Capsella rubella (pink shepherd's-purse): 17896060
Entry
17896060          CDS       T02984                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
crb  Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:crb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:crb03041]
    17896060
Spliceosome [BR:crb03041]
 Complex B
  Other components
   Complex B specific factors
    17896060
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_EML LisH_TPL Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_ACSF4 Beta-prop_NWD2_C WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_Aladin Beta-prop_VPS8 Beta-prop_SCAP Ge1_WD40 Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_Nup120_160 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd DUF7165 Beta-prop_HPS5 Beta-prop_WDR19_1st VPS8_N Nucleoporin_N Beta-prop_IP5PC_F Beta-prop_NOL10_N WD_LRWD1 zf_topless Beta-prop_IFT122_2nd Beta-prop_CGLA
Other DBs
NCBI-GeneID: 17896060
NCBI-ProteinID: XP_006302150
UniProt: R0IEB9
LinkDB
Position
Unknown
AA seq 512 aa
MALEIEARDVIKIMLQFCKENSLNQTFQTLQSECQVSLNTVDSVETFISDINSGRWDSVL
PQVSQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQPERYLRMEHL
LVRSYFDPHEAYGDTTKERKRAQIAQAVAAEVTVVPPSRLMALIGQALKWQQHQGLLPPG
TQFDLFRGTAAMKQDVEDTHPNVLSHTIKFGKKSHAECARFSPDGQFLASSSVDGFIEVW
DYISGKLKKDLQYQAAETFMMHDDPVLCIDFSRDSEMLASGSQDGKIKVWRIRTGLCIRR
FDRAHSQGVTSLSFSRDGSQLLSTSFDHTARIHGLKSGKLLKEFRGHSSYVNNAIFTSDG
NRIITASSDCKVKVWDAKTTDCLQTFKPPPPLRGNDASVNSVHLFPKNTEHIVVCNKTSS
VYIMTLQGQVVKSFSSGKREGGDFVAACVSTKGDWIYCIGEDKELYCFNYQTGKLEHFMM
VHEKDVIGITHHPHRNLLATYSEDGTMKLWRP
NT seq 1539 nt   +upstreamnt  +downstreamnt
atggcgctcgaaatcgaagctcgagatgtaataaagattatgcttcagttctgcaaagaa
aactccttgaatcagacgttccagacattgcagagcgaatgtcaggtttctttaaataca
gtagacagcgtcgagacgtttatttctgatattaatagtggaagatgggactcggtacta
cctcaagtttctcagcttaagcttcccaggaataagctagaagacctttatgaacagatt
gtattggagatgatagagcttcgagaattggacactgcccgagctattttgaggcaaact
caggtgatgggtgtcatgaaacaggagcaaccagaaagatatctgcggatggagcatctt
ctagtcagaagctattttgatccgcatgaggcttatggagacacaaccaaagaaagaaaa
cgtgcacagattgctcaagctgtggctgccgaggttaccgtagtaccaccttcacggtta
atggctttgataggtcaggctttaaagtggcaacagcatcaaggcctgctccctccagga
actcagtttgacctctttcgtgggacagcagctatgaaacaagatgtagaagacacgcat
ccgaatgtccttagtcatacaataaagtttggtaaaaagagtcatgccgaatgcgctaga
ttttcaccagatggacagtttcttgcatcttcatctgttgatggtttcatcgaggtatgg
gattacattagtggaaagctgaagaaggatttgcaatatcaagctgctgaaactttcatg
atgcatgatgaccctgtcctttgtatagactttagcagagattcagaaatgcttgcatct
gggtcacaagatggaaagattaaagtctggcgtataaggactggtctatgcattcgtcgt
tttgaccgtgcacattctcaaggagttacaagtctgtccttctctcgagatggaagccaa
ttactgagtacctcctttgaccacactgcaagaatccatggcttaaaatctgggaaattg
ttgaaagaatttcgcggtcattcttcttatgtaaataacgccatctttacaagtgatgga
aaccgtataatcactgcctccagtgattgtaaagtgaaggtttgggatgcaaagacgaca
gattgtctacaaacattcaagccgccacctccattaaggggaaatgacgcatctgtcaat
tctgtccatctgttcccgaaaaacactgaacacatcgttgtgtgcaacaagacatcatca
gtatacatcatgacgctccaaggacaggttgtgaagagtttctcatccggtaagagggaa
ggaggagattttgtagcagcatgtgtatctacaaaaggagattggatatactgcatcggt
gaagacaaggaattgtactgcttcaactatcaaaccggtaaacttgagcatttcatgatg
gtgcatgagaaggatgtgattggtataacacaccaccctcatagaaacctgcttgctacc
tatagtgaagatggcacaatgaagttatggaggccttga

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