Capsella rubella (pink shepherd's-purse): 17896118
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Entry
17896118 CDS
T02984
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00541
Biosynthesis of various nucleotide sugars
crb01100
Metabolic pathways
crb01250
Biosynthesis of nucleotide sugars
Module
crb_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
17896118
Enzymes [BR:
crb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
17896118
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Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
NmrA
DUF4942
Motif
Other DBs
NCBI-GeneID:
17896118
NCBI-ProteinID:
XP_006301908
UniProt:
R0GGH0
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MASYTPKNILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKQSPNFK
FVKGDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
TGQIRRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
VITTRGNNVYGPNQFPEKLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVVLH
KGEVGHVYNIGTKKERRVNDVARDICKLFNMDPEANIKFVDNRPFNDQRYFLDDEKLKKL
GWSERTTWEEGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPGGRHFDGSEDNSLAATL
SEKPSQTHMVIPSPRSSGTPQKPSLKFLIYGRTGWIGGLLGKICEKQGIAYEYGKGRLED
RSSLLQDIQSVKPTHVFNSAGVTGRPNVDWCESHKAETIRANVAGTLTLADVCREHGLLM
MNFATGCIFEYDDKHPEGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEFDNVCTLRVRM
PISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGVWNFTNPGVVS
HNEVLEMYRDYINPEFKWANFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKESLIK
YAFEPNKKT
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtatactcccaagaacattctcatcaccggagctgctggtttcattgcatct
catgtcgccaacagactcatacggagctatcctgattacaaaattgttgtgcttgacaag
cttgattactgttcaaacctcaagaatctcaatccttctaagcagtctcctaatttcaag
tttgtcaaaggtgacatcgccagtgccgacttggtgaatcatcttctcatcactgaaggt
atcgacaccatcatgcacttcgctgctcagacgcatgtcgacaattccttcggtaacagt
ttcgagtttactaagaataatatctatggaactcatgtgcttcttgaggcttgcaaagtc
actggtcagattaggaggtttattcatgtcagtactgatgaggtttatggggagactgat
gaggatgctcttgttggtaaccatgaggcttctcagctgcttccaacgaatccttactct
gcaacgaaagctggtgctgagatgcttgttatggcctatggcagatcatatgggttgcct
gttattaccacgcgtgggaataacgtctatggtccgaatcagtttcctgaaaagttgatt
cctaaattcattttgttggcgatgagggggcaagttcttcccattcatggagatggatca
aatgttcggagctacctgtactgtgaagatgttgctgaggcatttgaagttgttcttcac
aagggagaagttggccatgtttacaatattgggacgaagaaggagaggagagtgaatgat
gttgccagagatatctgcaaactctttaacatggaccctgaggcaaacatcaagtttgtt
gacaacagaccttttaacgatcaaaggtacttccttgacgatgagaaactcaaaaagttg
ggctggtcagagaggaccacgtgggaggaaggattgaagaaaactatggattggtacaca
cagaacccggaatggtggggagatgtttctggagcattgctacctcatccaaggatgctg
atgatgcctggtgggagacactttgatggctccgaggacaattcgttggcagctacttta
tctgaaaaaccaagtcaaacccatatggtgattccaagcccaagaagcagcggcacacca
caaaagccttcactgaagttcttgatatatggaaggaccgggtggattggtggtctgctt
ggaaagatatgtgagaagcaaggaattgcttacgagtatgggaaaggccggttggaggat
cgatcatctcttttgcaggatattcagagcgttaagccaacccatgttttcaattccgct
ggagtgactgggagacccaatgttgactggtgtgagtctcacaaggctgagactatccgt
gctaatgtcgctggcacattgactctagctgatgtctgcagagagcacgggctcttgatg
atgaatttcgctactggttgtatattcgaatatgatgacaagcatccggaaggttcagga
attggcttcaaagaggaagacacacccaacttcactggttctttctactcaaaaaccaaa
gccatggttgaggaactgctgaaggagtttgacaatgtatgcacattgagggtaaggatg
ccaatatcctcagatctaaacaacccacgcaacttcatcaccaagatctccaggtacaac
aaggtcgtgaacataccaaacagcatgactgtgttggacgagcttttaccaatctcgatc
gagatggctaaaagaaacttgagaggggtctggaacttcacaaacccgggtgtggtgagt
cacaacgaggtcctagagatgtacagagactacatcaaccctgaattcaaatgggcaaac
ttcacgttagaagagcaagctaaagtcattgtggctccaagaagcaacaacgagttggac
gcttctaagctcaagaaagagttccctgagctactctccattaaggagtctctgattaag
tatgcatttgagccaaacaagaaaacctga
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