Capsella rubella (pink shepherd's-purse): 17896176
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Entry
17896176 CDS
T02984
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
17896176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17896176
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
17896176
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
17896176
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
RRP40_S1
ECR1_N
Motif
Other DBs
NCBI-GeneID:
17896176
NCBI-ProteinID:
XP_006301078
UniProt:
R0GEC9
LinkDB
All DBs
Position
Unknown
AA seq
303 aa
AA seq
DB search
MMMRKLKLELPLNQTQKVRFERAMERLKLLTSETNNSVIVADSIHEDALLLKGHGTSEVD
GELLANVCGVIVHVDKLVYVRTLRAKYKPEVRDIVVGRVIEVFQSCWRVELNSNQDGVLK
LSSMNMPDTVQRRKTSADELNMRDIFVEDDVVCAEVGCIHRDGGLELQASSHKYGKLEKG
ELLKVDPYLVNKSYHHFHYIESLGIDLILGRNGYIWVGEHVQVQDPLIVETRKEQSHTPL
ETRQNILRIGNAIRVLSNLGFTMTKEVIMETSNLSNKENIDLHDMLGSEFHVLVAENEAG
RRR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgagaaagcttaagctagagttaccattgaaccaaacgcagaaggttaggttt
gagagagctatggagcggctaaaattgttgacgtcggaaacaaacaactctgttatcgtt
gctgactcaatccacgaagatgccttgctccttaagggacatggaacatccgaggtagat
ggtgagttgcttgcgaatgtttgtggtgttatagttcacgtggacaagcttgtctatgta
cgtaccttgcgagccaagtataagcctgaggttagggatattgtggtaggacgtgtaatt
gaggtctttcaaagctgttggagagtagagctcaactctaatcaagatggagtactgaag
ctttcttccatgaatatgcctgatactgttcagaggcgaaaaacgtctgctgatgaactc
aatatgcgagatatctttgtagaagatgatgtcgtttgtgctgaagttggatgtattcac
cgcgatggcggcttagagcttcaagcttcaagtcacaagtatggcaagcttgaaaaggga
gagctactcaaggttgatccttacttggttaataaaagctaccatcactttcactatata
gaaagtcttgggattgatttaatacttggccgcaatggttatatttgggttggggaacac
gtccaagtccaagatcctttgattgtagaaacaagaaaagaacaaagccatactccactc
gagactcggcaaaacattctaagaattgggaatgcgatacgggtcttgtctaatctaggc
ttcaccatgactaaagaagtgattatggaaactagtaacttaagcaacaaggaaaatatt
gacttacatgacatgcttggatcagagtttcacgttttggtcgcagagaacgaagctgga
agaagaagatga
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