Capsella rubella (pink shepherd's-purse): 17896233
Help
Entry
17896233 CDS
T02984
Name
(RefSeq) nuclear pore complex protein NUP98B
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
17896233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17896233
03036 Chromosome and associated proteins [BR:
crb03036
]
17896233
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
17896233
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
17896233
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
17896233
NCBI-ProteinID:
XP_023642866
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MFGSSNPFGQSSNSSPFGTQTQSLFGQTNNTSNNPFAVKPFGTSTPFGAQTGSSMFGGTS
TGVFGAPQTSSPFGASSQAFGSSTPAFGASSTPAFGNSASPFGGASTFGQKTFGLSTPHS
SPFGNSTQQPAFGNSSFGASNTPAFGASSSPAFGASNTSAFGASNTSAFGATSTPAFGSA
NTPNFGASSTPSFGASSSPAFGASPAPAFGSSGTAFGNNAFGTGGAFGASSTPAFGASST
PTFGASSTPSFGASNTPAFGASSTPSFSFGSSPAFGQSTSAFGSSGFGSTQSPFGAQGAQ
VSTPTFGGQQGGSRVMPFAPTNDAESGGNSGNLQSISAMPAYKEKNQEELRWEDYQRGDK
GGQLPAGQSLGGTGFGVTTSQPSTFSPSPTFGQTPANPANPFAQKTQTTTPNFSSPFGPP
TTPSFGPPTTPSFGQPTTPSFSQTTTPSFGQSTAPSFGQPTTPSMFGSTASNTISLFGSS
SSFATNTSQPFGSAPAHGSNSTFSIGGNFNNQSSPLFGPNPSGQNTTPAFPHTNPVFGQN
TNPTNGQSNIFSSPSTGAANLFSSSSSPTTNISPFGQITPPVSAYQSVQPTQPSGALGFN
NFGQTQTGGMGNFSQGNFKQGPALGNSAVMQPSPVTNPFGTLPALPQISIGQGGNSPSIQ
SGISSMPVVDKPAPVRVSPLLTSRHLFQRRVRLPTRKYRPGDDGPKVPFFSDEENSSTPK
ADAFFIPRENPRALFIRPVERVKSEHPKDDPTPLQENGKKSNGVTNGAHHENKNDGETCE
APPVKANQKPNGTHENDRGDKNSSYSSPSGADIESLMPKLHHAEYFTEPRIQELAAKERI
DPGHCKRVKDFVVGRHGYGSIKFLGETDVCRLDLEMVVQFKNREVNVYMDESKKPPVGQG
LNKPAVVTLLNIKCMDKKTGTQVKEGARLDKYKEMLKRKADEQGAKFVSYDAVKGEWTFK
VEHFSSYKLGDEDDV
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttcttctaatccttttggacagtcatctaacagcagtccatttgggacccaa
acgcaatctttgtttgggcagaccaataacacgagcaataatccctttgctgtgaaaccc
tttggtacgtctactccttttggcgcacagacagggagttccatgtttgggggcacttca
accggcgtatttggtgcacctcaaacttcttctccttttggtgcttcatcacaagcgttt
gggagctctactcctgcttttggagcatcttctactcctgcatttggtaattcagcttca
ccttttgggggcgcttctacgtttggtcagaagacttttggcctctcaacgcctcattca
agtccttttggaaactccacacagcagcctgcctttggaaacagctcttttggtgcctca
aacacgcctgcctttggtgcctctagctcgcctgcttttggcgcctcaaacacttctgcg
tttggcgcctcaaacacttccgcgtttggagccacaagcacgcctgcctttggctccgca
aacacacctaattttggtgcctcaagtacaccttcattcggcgcctcgagctcacctgca
tttggcgcgtcacctgctccagcctttggtagctctggcactgcatttggcaacaatgcc
ttcggtactggaggtgcttttggtgcatccagcactcctgcgtttggtgcatcaagcact
cctacatttggtgcgtcaagcactccttcgtttggggcatcaaatactcctgcctttggg
gcatcaagtaccccatcttttagttttggctcttccccagcgtttggacagtctacctca
gcatttggtagcagtggctttggttctacacagtctccctttggagcccaaggtgcacag
gtatcaactccaacatttgggggtcaacaagggggtagtagggtcatgccttttgcacct
acaaatgatgccgagtcaggcggtaactcagggaatctacaatctatatctgccatgcct
gcatacaaagaaaaaaaccaggaggagcttaggtgggaggactaccagcgaggagataaa
ggtggacaacttcctgctggtcaatctcttggaggtactggatttggagtaacaacttct
cagccaagtacattctctccttcaccaacgtttggccagacacctgcaaatccagcaaac
ccttttgcacagaagactcaaacaactaccccaaatttttcctcaccgtttggtccaccc
actaccccatcatttggtccacccactactccatcctttggtcaacccactaccccatcc
tttagtcaaaccactaccccatcctttggtcaatccactgccccatcctttggtcaaccc
actaccccatccatgtttgggtcaactgcatcaaataccatatccctttttggatcatcc
tccagttttgcaacaaacacatcgcagccatttggttcagctcctgcacatgggtcaaat
tcaacatttagcattggtggaaattttaacaatcagtcatctccgctgtttggtccaaac
ccctctgggcagaatacaactcctgcattcccacacactaatcctgtgtttggacagaat
accaatcctacaaatggacagagtaacattttcagctcaccttccactggcgcagcgaac
ctgttttcaagctcttcatccccaactacaaacatctctccctttggtcaaataacgcct
cctgtttcggcttaccaatcagttcagccaactcaaccatcaggtgctcttggtttcaac
aactttggtcaaacacaaacaggtggaatgggaaattttagccaaggcaattttaagcaa
ggacctgcattgggtaactctgctgttatgcaaccaagtcctgttacaaacccctttgga
acgcttcctgctttgcctcagatttcaattggtcaaggtggaaattcaccttcgattcag
tctggaatctccagcatgcctgttgttgataagcctgctcctgttagagtatcaccactc
ctgacttctcgacaccttttccaaaggcgggtcaggctacctacaagaaagtaccgtcct
ggtgatgatggtccaaaggttccattcttcagtgatgaagagaattccagtacaccaaag
gctgatgcctttttcattccaagggaaaaccctagagcactatttatacgcccagttgaa
agggtaaaatcagaacatccaaaggatgacccgaccccactgcaggagaacggtaagaag
tcgaatggggttactaatggagcccaccatgagaacaagaatgacggtgaaacttgtgag
gctcctccggttaaagccaatcagaaaccgaacgggacacatgaaaatgacagaggcgac
aaaaacagttcatacagttcaccaagtggagcagatatcgagtcattgatgccaaagctg
catcacgctgaatatttcacagagcctcggatccaagaactggctgcaaaagaaaggatt
gatcctggtcattgcaagcgggtaaaggactttgttgttgggagacatggttacgggagt
ataaagtttctaggagagacagatgtgtgtagactcgacttggaaatggtggttcagttc
aaaaaccgagaagtgaatgtgtacatggacgagagcaaaaaaccgccagtgggtcaagga
ttgaataagcctgcggtagtaactttgctgaacataaaatgtatggacaagaagaccggt
acgcaagtgaaggaaggcgccagattggacaagtacaaggaaatgctgaagaggaaagct
gatgaacaaggagctaagtttgtgtcttatgatgctgtgaaaggcgagtggacgttcaaa
gtggagcattttagttcctacaagcttggagatgaagatgatgtgtag
DBGET
integrated database retrieval system
