Capsella rubella (pink shepherd's-purse): 17896478
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Entry
17896478 CDS
T02984
Name
(RefSeq) protein FORGETTER 1
KO
K26273
protein strawberry notch
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crb03036
]
17896478
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
17896478
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
Zn_ribbon_FGT1_1
Zn_ribbon_FGT1_2
SBNO
PHD
ResIII
DUF349
PHDvar_NSD
Zot
PHD_4
HECT_2
Motif
Other DBs
NCBI-GeneID:
17896478
NCBI-ProteinID:
XP_023644070
LinkDB
All DBs
Position
Unknown
AA seq
1296 aa
AA seq
DB search
MTQSPVQPPPPLPAPPHSAGGGVLRGDVQVRCAGCRVILRVKTGVVEFSCPTCQLPQMLP
PELLSRARPQFPQSQQPPQPQPIQTLPPPIQQQLKPLNLPRPPVPAHGIDPTKMQLPCAN
CQAILNVPHGLTRFSCPQCHVELAVDVSKLNRSLTAPLSHPNPPPPAAPPVPPPPPPEEV
NEEAIEVEREEDEGGTAGETFMDYRPPKLSIGPPHPDPIVETSSLSAVQPPEPTYHLKIK
EELERSKALSCLQIETLVYACQRHLQHLADGTRAGFFVGDGAGVGKGRTIAGLIWENWKH
GRRKALWISIGSDLKYDARRDLDDVGATCVGVNPLNKLPYSKLDSKNVGVKEGVVFLTYN
SLIASSEKGRSRLQQLVQWCGPEFDGLLIFDECHKAKNLVPEAGSQPTRIGQAVVDIQDK
IPQARVLYCSATGASEPRNMGYMVRLGLWGAGTSFSDFNKFLGALDKGGTGALELVAMDM
KARGMYVCRTLSYKGAEFEIVEARLEEGMEAMYNKSAEFWAELRIELLSASAFLPNEKPN
SSQLWRLYWSSHQRFFRHLCMSSKVPVTVRLAKKALSTNKCVVIGLQSTGEARTEEAVTK
YGLELDDFVSGPRELLLKFVEENYPLPEQPEPLSEDDSVKELHRKRHSASPGVSIRGRVR
KMAKWKPDTDDESDLESEAESADDSNDSDDEFQICQICSGEDERKKLLHCSECDKLFHPD
CVVPPVTDLPSEAWICYSCKEKTEEYIQARRLYIAELQKRYEAALERKSKILEIIRALNL
PNNPLDDIVDQLGGPDKVAEITGRRGMLVRASNGKGVTYQARNTKDITMEMVNMNEKQLF
MDGKKLVAIISEAGSAGVSLQADRRAVNQKRRVHLTLELPWSADRAIQQFGRTHRSNQTS
APEYRLLFTNLGGERRFASIVAKRLETLGALTQGDRRAGPSGPSLSAYNYDSNFGKKSLM
VMYRGIMEQEKLPVVPPGCSVDEPETIKEFLTKARAALVAVGIVRDSVLANGKDVGKFSG
RIIDSDMHDVGRFLNRLLGLPPDIQNRLFELFTSILDVLVHNARIEGSFDSGIVDMKANS
VELLSTPKTVHVDQMSGASTMLFTFTLDRGVTWESASSMLDGKRRDGLGSANDGFYESKR
EWLGKRHFILAFESAASGLFKIVRPAVGESIREMSLSELKTKYRKLSSLEKAQTGWEDEY
EVSSKQCMHGPKCKLGEYCTVGRRIQEVNVVGGLILPIWGTIEKALSKQSRHSHKRVRVI
RIETTTDNQRIVGLSIPNAAVETVLQDLAWVQEVDD
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagtcgcctgttcaaccgcctccgccgcttcctgctccgccgcattccgccggc
ggaggtgtattaagaggcgatgtacaggttaggtgcgctggctgtcgcgtgattctgagg
gtgaagacgggcgttgtcgagttctcttgtcccacttgtcaacttccccaaatgttgccg
ccggagcttctttctagggcacggccgcagtttccgcagtctcaacaaccaccacaaccg
cagccgattcagacgctcccgccaccgattcaacagcagcttaagcctcttaatttgcct
aggcctccggttccggcacatggaatcgatccgaccaagatgcaattgccttgcgctaac
tgtcaggctatcctcaatgtgccacatggcctcactcggttctcctgtccgcagtgccat
gtcgagctcgctgttgatgtctccaagcttaatcgttctttaactgctcctctatctcat
cctaatcctcctcctcccgctgcgccgcccgttccgcctccgcctcctcccgaagaagtc
aatgaggaagctattgaagtggagagagaagaagacgaaggtggaacagcaggagaaacg
tttatggattatcgtcccccgaaactttcaatcggacctcctcatcctgatccaattgtg
gaaacatcatctctatctgcagtgcaacccccagagcccacttaccatctcaaaatcaag
gaagagctcgaaaggtcaaaggctttatcgtgcttgcagattgagacattagtttacgct
tgtcagaggcatctccagcaccttgctgatggtaccagagcaggcttttttgttggagat
ggtgctggtgtggggaaagggcgaacaattgccgggttgatttgggaaaattggaaacat
ggaaggaggaaagctttgtggatttctattggctcagacttgaagtatgatgcaagaagg
gacttggatgatgtaggtgcaacatgcgttggagtgaatccattgaacaagctaccttat
tcgaagcttgactcaaaaaatgtcggtgttaaagaaggagtagtattcttgacatacaat
agcctcattgcttcctctgagaagggccgttctcgtttacagcagcttgttcaatggtgt
ggaccagaatttgatggtctcttgatctttgacgagtgccataaagcgaaaaatttggta
cctgaagctgggagtcagccaacacgcatcgggcaggcagttgttgacattcaggataag
atcccccaagcacgtgttctttattgctctgctactggtgcatcagaaccacgaaacatg
ggttatatggtcaggcttggtctttggggagctggaacaagtttcagtgattttaacaaa
tttctaggtgcccttgataaaggtgggacaggagcgttggaattggttgcaatggacatg
aaagcgaggggaatgtatgtatgccggaccctgagctacaaaggggctgagtttgagatt
gttgaagctcgtttagaagaaggaatggaggcaatgtacaataagtctgcagaattttgg
gcagagctacggatagagttgttgtcagctagtgcttttctccctaacgagaaaccaaac
tctagtcagttgtggagattatactggtcaagccaccagcgtttctttagacacttatgt
atgtcatctaaagtccctgtaactgtgagattagcgaagaaagccttgtcgacaaacaag
tgtgtggttattggtcttcagagtaccggagaggctcgaaccgaagaggctgtaactaaa
tatggtcttgagcttgatgattttgtctcgggacctcgagagctcttgttgaaatttgtg
gaagagaattatcctttacccgagcagcctgaacctttgtcagaggatgatagtgttaaa
gaacttcacaggaagagacattcagcttcacctggtgtttcaattagaggtagagtaaga
aagatggcaaagtggaaaccagatactgatgatgaaagtgatttggagtctgaagctgaa
tctgctgacgattctaatgattctgatgatgagttccagatatgtcagatatgcagtggg
gaagatgaaaggaagaagttgctccattgttctgaatgtgacaagctatttcatccggac
tgtgtggttcctccagttacagacttaccatctgaagcgtggatatgctattcttgcaag
gaaaagacagaggagtacattcaagcaagacgtctctacattgcagaattgcaaaaacgg
tatgaagcagcgctggaacgaaaatcaaagatcctagagattatccgtgccctgaatctt
ccaaacaatcctttagatgacattgtcgatcagcttggaggccctgacaaagttgcagaa
ataacaggcaggcgaggtatgcttgtaagagcatctaatgggaaaggtgttacatatcaa
gcaagaaacacaaaggatatcacaatggaaatggtcaacatgaacgagaaacaactattt
atggatggtaaaaagttggttgccattatttctgaagctggttcagctggtgtttcgtta
caagcagatagaagggcagtaaatcagaaaagaagggttcacttgactttagagcttccc
tggagtgctgatcgtgcaattcaacaatttggaagaactcaccggtcgaatcagacatct
gctcctgaatataggttactcttcacaaatctcggtggggaacgccggtttgcctctata
gttgcaaagagactagaaactcttggtgctttaacacagggagaccgcagggctgggccc
tccgggccttctttgagtgcctacaattatgatagcaactttggtaaaaaatccttgatg
gtgatgtatagaggaataatggagcaggagaaattacctgttgttcctcctggatgctcg
gttgatgaacccgaaacaatcaaagagtttttgaccaaagcaagggctgctcttgttgcg
gttggaattgttagggacagtgttctggccaatgggaaagatgttggaaagttttcagga
cgtattattgattctgacatgcatgatgttggacgatttctgaatcgcctattgggattg
ccacctgatatacagaataggttgtttgaattgtttactagtatattagacgttcttgta
cataatgctcggatcgaaggaagttttgattcaggaattgtggatatgaaagctaatagt
gttgagctgctgagcactccaaagactgtccatgttgatcaaatgtctggtgcctcaact
atgctctttacttttactctagatcgtggtgttacatgggagtctgcaagttcaatgcta
gatgggaagagaagggacgggcttggttctgctaatgatggcttttatgaatctaaaagg
gaatggttaggaaaacgacacttcatattagcatttgagagtgcggcttccgggttgttt
aagattgtccgtcctgctgtaggagagtcaatcagggagatgtctctttcagagttgaaa
actaaataccgaaaactctcttctctggagaaggctcagactggttgggaagacgagtac
gaagtttcttctaaacagtgtatgcatggacccaaatgtaagctgggcgagtattgcact
gttgggcgaagaatacaggaagtaaacgttgttggtggcctcattcttcccatctgggga
acgatagagaaagctctctcgaaacaatcccggcatagccacaagagagttcgagttata
cgtatagagactacgacggacaatcagcggatagtgggcctctctatacctaatgcagct
gttgaaactgtattacaagatttagcatgggttcaagaggttgatgattaa
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integrated database retrieval system
