Capsella rubella (pink shepherd's-purse): 17896698
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Entry
17896698 CDS
T02984
Name
(RefSeq) UPF0505 protein isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17896698
Membrane trafficking [BR:
crb04131
]
Protein recycling
Others
Retriever complex
17896698
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
DOG1
Motif
Other DBs
NCBI-GeneID:
17896698
NCBI-ProteinID:
XP_023646048
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MEFEFRRRDYGATIDSQLLPRSQAHKHPLSSTLVSRQQQAKTVRGSEIDFFDPLRGLDVN
ASAEEEVEDTSISTEAATQDLIKEWKLLKRILMQRFPVSKIISFSPISNIIMKGSKAVEA
PSVLSHSEETGSEQISLEETAKIMNQQEYMAKVHELRDGITCAWQAEDRVTSLKLSIKVT
KLLMDTTVLQFYPTVFVIVTDMLDMLGDMVWERIKQKAELDIDGTVICSLLNDFQASDIC
LEARETCYNWFCKVGSVRELLPRIYLELAILPCWRFLINQPMEVLDRLLMMVRGLADPLA
SLYCRLYMVHRMQKFGFCNSGYLIKCIKDIEDVLAPILVDKEGYSYITDDKKLFFSLIEP
AIEYIMKCLFLTGRQEKNVLGMLEELGFGRKKLHSSYNPSHMSILLHYLLKELPSELVSS
LAMEILDMIKCSNDCSFSQVLNYKLLGTRLSEGKSQDGFLSSLINEVIQAASQYQSLYDY
LRIIDAYVDLTLQNKMENHLDALLDDIVRLSCDKFLTEEEQASLQSIILKLLSHFENLQE
VLSLNHFIEILDLMSGTSKSSVNMHLLNMGTRNGCISDSTTVQLLFEVSQALYDATDFVT
IKDDDNRQTSHLISRFVEMVDYGAEMERHLMFLAECREAFNGIHELKETLVRSSNTLAVK
ALKAGKKHINFVKSCLAFSEVTIPSVSTPTKHLNLYLETAEVALLGGLISHSDGLVMSAV
EYLENVAGTDGLRSIDVDSMASVVCKLCSLLVMVPGNPEKDVMEILQSIFSATCSSSWAM
QRLKVKLFCAIISLSSTLSQDNLPYHCANPEIIGNDLLFFGDSSYKQELVSFTQLVLGEL
LNAIEKESSQIVRGNLALEACNCISSALVMNEKVSQVCLRLLETAKGCLGANDRYMESTK
KYLQL
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgaattccggcgtcgcgactacggagctacgattgattctcaacttcttcct
cgatcacaagctcacaagcatcctctttcctctacactcgtttctcgtcaacaacaggct
aaaactgtcagaggcagcgagattgacttctttgatcctttgaggggactggatgtgaat
gcttctgcggaagaggaggttgaagatacttctatatccactgaagctgcaactcaggat
ctgataaaggagtggaaattacttaaaagaatcttgatgcagcggtttcctgtctccaaa
attatatcattttctccaatatctaatataataatgaaaggttccaaagcagttgaggcc
ccttctgttctttcccattcggaggaaaccggcagcgaacaaatttctctggaagagact
gccaaaataatgaaccaacaggaatatatggccaaagtgcatgaattaagagatggaatt
acttgcgcttggcaggctgaagatcgagtaacatcgttgaagttatcaataaaggtcaca
aaacttctgatggatacaacagttctgcagttttatcctactgtctttgtcattgtcact
gacatgctagatatgcttggggatatggtgtgggaaaggatcaaacagaaagcagaactt
gatatagatgggacagtgatctgctccttactgaatgattttcaagcaagtgatatctgt
cttgaagcaagagagacttgctataactggttttgcaaagttggttctgttcgagaactt
ctccctcgcatttatctggagcttgcgatcttaccttgctggcgtttcctcattaatcaa
cccatggaagttctggatcgtttactcatgatggtgagaggtctcgcagatccactggca
tctttgtattgtcgtctttatatggtgcatcgcatgcagaagtttggtttctgcaattca
ggatatttaatcaaatgcatcaaggatatcgaagatgtattggcgcctattttagttgac
aaggaggggtattcctatattacagatgacaaaaagttgttttttagtttgattgaacca
gccatcgagtatataatgaaatgcttatttctgactggacgtcaggagaaaaatgtcttg
ggcatgcttgaggagcttggatttggaagaaaaaaacttcattcgtcttacaacccttca
cacatgtccattttacttcattatctactcaaggaacttccatccgaattagttagttca
ctagctatggagattctggatatgattaaatgcagcaatgattgttcctttagtcaggtt
ttgaattataagctgcttggaactagattgtctgaagggaaatctcaagacggttttctc
agttcactcattaatgaagttattcaggctgcttctcagtatcagtcactgtatgactac
ttaagaattattgacgcatatgtggatcttacattacagaacaagatggaaaatcatctg
gatgctctcttggatgatattgtacgtctatcttgtgacaagtttcttactgaagaagaa
caagcaagtttgcaatccataattttgaagctgctctctcatttcgagaacttgcaagaa
gtactttctctgaatcatttcatcgagattctggatcttatgtctgggacttcaaagagc
agcgtaaacatgcatcttcttaacatgggcactaggaatggctgcatttctgattcaacg
actgtgcaattactttttgaagtttctcaggctctttacgatgctacagatttcgttacc
ataaaggatgatgacaatagacagacatcacatttaatttctcgttttgttgagatggtt
gactatggggcagaaatggaacgccatttgatgtttttggctgagtgtcgtgaggccttt
aatgggatacatgaacttaaggagacgcttgtccgttcaagcaacaccttggcagtaaaa
gcactaaaggcaggaaagaagcatatcaactttgtaaaatcttgcctagcatttagtgaa
gtgaccatcccatctgtttcaactcccacgaaacacttaaatctttatcttgaaaccgct
gaggttgcacttttaggtggtttgatatcccattcagatggactagtcatgtcagctgtt
gagtatttagagaatgtagcggggaccgacggtctaaggtcaattgatgtagatagtatg
gcctcggttgtatgcaaattgtgcagcctcttggtaatggtcccaggtaatcccgagaaa
gatgtgatggagatccttcaaagcatcttttctgctacttgctctagttcatgggcaatg
cagagattgaaggtgaagctattctgtgctataatttcactgtcttcaacactttctcag
gataatctaccttaccattgtgccaatccagagataattggaaatgatttgctgttcttt
ggtgattcatcatacaagcaggaacttgtctcgttcacgcagctagtactaggtgaacta
ttaaatgctattgagaaagagtcttcacagatcgttcgcgggaacttggcactcgaagct
tgcaattgcatatcatcagcattagttatgaatgagaaagtctcacaggtttgcctgaga
ctacttgaaacagcaaaaggttgtttgggtgccaacgataggtacatggaatctactaag
aaatatctccagttatga
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