KEGG   Capsella rubella (pink shepherd's-purse): 17896699
Entry
17896699          CDS       T02984                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
crb  Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:crb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:crb04812]
    17896699
Cytoskeleton proteins [BR:crb04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     17896699
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_SPT8 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_EIPR1 eIF2A Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_IP5PC_F VPS8_N PROPPIN Ge1_WD40 Beta-prop_WDR75_2nd Mitoc_L55
Other DBs
NCBI-GeneID: 17896699
NCBI-ProteinID: XP_023645552
LinkDB
Position
Unknown
AA seq 1050 aa
MNLLKSTRNMANRGYKLQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSL
MSLCGHTSPVDSLAFNSAEVLVLAGASSGLIKLWDLQEAKMVRAFTGHRSNCCAVEFHPF
GDFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGITTIKFSPDGRWVVSGGLDNVVKVWDL
TAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADGTVKFWDLETFELIGSTRPEATGVRA
ITFHPDGQTLFCGLDDGLKVYSWEPVICQDGVDMGWSTLGDFCINGGKFIGCSYYRNSVG
IWVSEISQLEPYGAGCEDNNGCMVKRFSVLDDQSSERMGSGPRCSSSPDYETREIKNIYV
DCGNINVAQNPGSLKPALPLELGKISNMASKKQNATNFGQAGDKYSSMHTVVSRDSDNGE
EPSHSGRESISFSRTKSGMLLKPAHVKKTREKFEDSKQSAVVQFETRKNSGLDVEAEPHT
QNVFLSEQSGSKPFDAEEATIKGMTDKFEKVLSSEPRTDEANRMLHKPPRVQRSSNNQCN
ESRRAMSIDSETFGNNKDGLDYSRGVDLPTGRNLFREDINNQNISSKTERVFLPEKTGDE
QKDTVYPGGSRELNPMNIVGGVKVVSGRTRSLVERFERGEKLTHMEAASSTITQNTNSGQ
EDPRKISRQTGETPIISTRRARSTPARVMPIVLNQDSNMTSDEPPLTQPARTSSVPVMPV
IINQATTVTYDERSVTLTQQSRTSPARRLPVTFNQAAQIASNEASVTSRRPGRTSSARVK
RVSLSQGMDMTSHECPVTLTRSSRTSPARVMPSKLNQPDNMTSHIASRHRVSPTQMLATP
TVIDQMADMALDETHVAQIQQACDNLPQKEEPEISGRENDSEIIDTLMQSHDEFLSTLQS
RLAKLQIVRHFWERSDVKGAIGALKNLTDQSVQADVISILTDKIEILTLDMFSQLVPVLT
SLLGSRTERPVNVSLDMLLKLVAVFGTVIRSTVSAPRVVGVDLHADERLEVCQICSAGLH
KIQRILPVLARRGGLITRKAQELNLVLQEP
NT seq 3153 nt   +upstreamnt  +downstreamnt
atgaatctactgaaatcgactagaaacatggcgaatcgtggttataagctgcaggagttt
gtggcacattccggaaatgtgaattgtctaagtatcggaaagaagacatcacggctcctt
ctaaccggtggagatgattataaggtcaacctttggtccatcggcaaaaccacttcgctt
atgagtctttgtgggcatacaagcccggttgactcattagcttttaactcggcagaagtt
ttggtgctagctggagcttcttcaggtttgataaagctgtgggatctacaagaagcaaag
atggttcgagcttttactggacacagatccaattgttgtgctgttgagtttcatccattt
ggtgactttcttgcttcgggatccagtgacacaaatctaagggtttgggataccagaaag
aagggatgcatccaaacgtacaagggtcatactcgtggcattaccactatcaaatttagt
cctgatggtcgttgggtagtgtctggaggacttgacaacgttgtaaaggtatgggatttg
actgctggaaagctcttgcatgagtttaaatttcatgaaggacctatccgttcactagac
ttccatccgcttgagtttctcctagccacaggttctgctgacgggactgtgaaattctgg
gatttggaaacgtttgaactgattggatctactagaccagaggctactggagttcgtgca
atcacgtttcatccagatggacaaactcttttctgtggattggatgatggcttgaaggtt
tattcatgggaaccagtgatttgccaggatggtgtcgatatgggatggtcaacacttggt
gacttctgcatcaatggaggaaagttcattggttgttcatattaccgaaattctgttggg
atttgggtctcagaaatatcgcaacttgaaccatatggagctggatgtgaggataataat
ggatgcatggtgaaaagattcagtgtcttggatgatcagtcctctgagagaatgggaagt
ggcccaaggtgcagttcatcaccagattatgagacacgagagatcaaaaacatatacgtt
gactgcggaaatataaatgttgcgcaaaatccaggatctctgaaaccggcattgcctttg
gaactaggaaaaatctctaatatggcgagcaagaagcagaatgcaacaaattttggacaa
gcaggggataagtattctagtatgcatactgtcgtatcgcgggatagtgataatggagaa
gaaccttctcattcaggaagggaatctatcagtttctcaagaacaaaatcgggtatgttg
ctaaaaccagctcatgtaaaaaagactcgagaaaagtttgaagattcaaagcagtcggcg
gttgttcagtttgaaactcggaagaacagtggattggatgttgaagcagagccgcacact
caaaatgtgttcctttcagaacagagtggtagtaaaccatttgatgcggaagaggctacc
atcaagggtatgacagacaagtttgaaaaagttttatcatctgaaccacgaactgatgaa
gcgaatcgtatgctgcataaaccacctcgtgtacagagatcatcaaataatcagtgcaat
gagtcaagacgagcaatgtctattgattctgagacttttggcaacaacaaagatgggttg
gattactcaagaggcgtagacttgccaacaggtagaaacttatttagagaggacatcaat
aaccagaacatttccagcaaaacagaaagagttttcttgccagaaaaaactggtgacgaa
cagaaagacactgtataccctggaggcagcagagaactgaatccaatgaatattgttgga
ggagtaaaagttgtctcagggaggacacgctcattggttgagaggtttgagagaggagaa
aaacttactcatatggaagcagccagttcaacaataactcagaacactaattcggggcag
gaagatccacggaagatatcaagacagacaggagaaactcctataatatcaacacggcga
gctaggagtactccagccagagtgatgcctatcgtgctcaatcaagatagtaacatgaca
tctgatgagcctcctttaacacaaccagctaggacttcttctgttccagtgatgcctgtg
ataatcaaccaagctactactgtaacctatgatgagcgttctgtaacattaacacaacaa
tctagaacttctccagcccggagattgcctgtgacattcaatcaggcggcacaaatcgca
tctaatgaggcttctgtaacatcaagacgaccaggcaggacttcttcagcacgagtaaaa
cgtgtgtcactcagtcagggaatggacatgacatctcatgagtgtcctgtaacattaaca
cgctcatctaggacttctccagcccgtgtaatgccctcaaaactgaatcaacctgataac
atgacatctcatatagcatccaggcaccgagttagtccaactcaaatgctggctacgccc
actgtgattgatcagatggccgatatggcgctggatgagacacatgtagcacaaattcaa
caagcttgcgacaacttaccgcagaaggaagagcctgaaatatctgggagggagaatgat
agtgaaatcattgatactctaatgcaaagtcatgatgaattcttaagcactcttcaatca
aggttggcaaagttacaaattgtaagacatttttgggagcgtagcgatgttaaaggcgcg
ataggggcattgaaaaatctgacagatcagtctgttcaagcagatgtgatcagtattcta
accgacaaaatagaaattctcactttggatatgttttctcaattggtcccagtcctcaca
agcttattgggtagcaggacagaaaggccggtaaatgtctccttggatatgctattgaag
cttgtagcagtcttcggtacagttatacgctcaactgtttcagctccacgagttgtcggt
gttgatcttcatgcagatgaaaggctagaagtctgccaaatatgttctgccggattgcac
aagattcaaaggattcttccagttctcgcaagaagaggcggtctaataacaagaaaggct
caagaactaaacctagttcttcaagagccataa

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