Capsella rubella (pink shepherd's-purse): 17896774
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Entry
17896774 CDS
T02984
Name
(RefSeq) 4-substituted benzoates-glutamate ligase GH3.12
KO
K14487
auxin responsive GH3 gene family
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
17896774
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
17896774
NCBI-ProteinID:
XP_006307122
UniProt:
R0IN21
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All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
MSLSVELKDLEDLTSNAKQIQDDVLKEILTLNANTEYLHRFLNGSTDKDLFKKNVPIVSY
DDVKPYIERVANGEPSDVISGGPITRFVRSSGTSGGKQKIFPTNDKYSEKLGYLMALSSL
VISKHFNGNVSHKGKKMGFLYNRLETKTPSGLLVSSAFATYFMSDYFKNRSSKCNLEYTS
PDQIILCIDINQSVYCHLLCGLSQRDKVVGVCATFAYALVQAINVLQISWTELSNNIRSG
QVSEWITDLDCKNAVSTILGGPNPELADVIEQECSHKSWEGIITRLWPKAKYIECIITGQ
MAQYVPTLEFYSKKLPIVSPMYGSSESLFGINLDPLSKPQDVSYTFVPDFSYFEFLPVDH
EGDIVDLVDVKLGCYYEPVVTNYFGLQRYLIGDILQVTGFYNATPQFRFVRRKDMVLSVD
VETTTEDDILKALARAALVLESSSYMLMSFTCYADISTCPGHYVFYWELKAKDGKDVVEL
DEKVLVECCSALEESFDALYRRFRSHGIIGALEIRVVQQGTFDSLMEYFVSQGGSIAQYK
TPMCIKSSEAFALLESKVLARFHSEQSPPLEF
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaagcgttgagctcaaagatctagaggatttaacatcgaacgcgaagcaaata
caagatgatgtattgaaagagatactcacacttaacgccaacacagagtatctccaccgc
ttcctaaatggaagcactgataaagatttgttcaagaagaacgtaccgattgtgagctac
gatgatgtcaagccttatatcgaacgtgttgcgaacggagagccttcggatgtgatttcg
ggcgggcctataactagattcgtccgaagctccgggacttcaggtgggaaacaaaagata
tttccaacgaatgataagtacagtgagaagctgggataccttatggctctatcctctctc
gttatttccaagcatttcaatggcaacgtttctcataaaggaaagaaaatggggtttctt
tacaacagattagaaaccaaaactccctccggattactcgtttcttccgcatttgcaacc
tatttcatgagcgattacttcaaaaaccggtcatcaaaatgtaatttagagtacactagc
cccgaccaaatcatattgtgcatcgacatcaaccaaagtgtgtattgtcatcttctatgc
ggcctttcacagagagacaaggttgttggagtttgtgctacctttgcttatgctttggtt
caagcaatcaatgttcttcaaattagctggactgaattgtccaataatatccgatcaggt
caagttagtgagtggatcactgaccttgactgcaaaaatgcggtctcaaccattcttggg
ggacctaaccccgaattggctgatgttatcgaacaagaatgcagccacaagtcatgggaa
ggtatcatcactcgactttggcccaaagcaaaatatattgaatgcatcattacaggacaa
atggctcaatatgttccaacattggagttttattccaagaaacttcctatagtttcccca
atgtatggatcttcagaaagtttatttgggataaatttggatcctttatccaaaccacaa
gatgtatcctacacctttgtgccggacttctcatacttcgagtttctaccagttgatcat
gagggagatattgttgatcttgtggacgtcaagttagggtgttactatgaacctgtggtc
actaattattttggtctacaaagatatcttattggcgatattctacaggtgactggattt
tacaatgccacacctcaatttagatttgtacgtagaaaggatatggttttaagcgtcgat
gttgaaacaacaactgaagacgacattttaaaggcgttggctcgtgcagcccttgttctt
gagtcttcaagttatatgttgatgagcttcacatgctatgctgacatctccacttgtcca
ggtcactatgttttttactgggaactcaaagctaaagatggtaaggatgttgtcgaactt
gatgaaaaagtattggtggaatgttgttctgcattagaagaatcctttgatgctctttat
agaagatttaggagtcatggaataattggagctttagagataagagtggtgcaacaagga
acattcgattctctcatggaatattttgtctcccaaggtggttcgattgctcagtacaag
acacctatgtgtatcaaatcttctgaagcctttgcacttcttgaaagtaaggttctcgct
agattccacagcgaacaatctcctcctcttgagttttag
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