Capsella rubella (pink shepherd's-purse): 17896780
Help
Entry
17896780 CDS
T02984
Name
(RefSeq) 4-coumarate--CoA ligase-like 5
KO
K10526
OPC-8:0 CoA ligase 1 [EC:6.2.1.-]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00592
alpha-Linolenic acid metabolism
crb01100
Metabolic pathways
crb01110
Biosynthesis of secondary metabolites
Module
crb_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
17896780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
17896780
NCBI-ProteinID:
XP_006303947
UniProt:
R0IEY1
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MASVNSRSGFCNSNKTFYSKRTPIPLPPNPSLDVTTFISSQAHRGRIAFIDASTGKNLTF
SELWRAVESVADCLYQMGIRKGHVVLLLSPNSILFPVVCLSVMSLGAIITTTNPLNTSGE
IAKQIKDSNPVIAFTTAQLLPKISAAAAKLPIVLMDEERVDSVGKVGRLVEMMKRKPSGN
RVMERVEQDDTATLLYSSGTTGMSKGVISSHRNLIAMVQTVVNRFGSDDGTQGEQRFICT
VPMFHIYGLAAFATGLLAYGSTIIVLSKFEMHEMMSAIGKYQATFLPLVPPILVAMVNGA
DQIKAKYDLSSMHTVLCGGAPLSKEVTEGFAEKYSTVKIMQGYGLTESTGIGASTDTVEE
SRRYGTAGKLSASMEGRIVDPVTGQILGPNQTGELWLKGPSIMKGYFSNEEATSSTLDSE
GWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQVAPAELEALLLTHPEITDAACIPFPDK
AVGQFPMAYVVRNTGSSLSEKSIMEFVAKQVAPYKRIRKVVFVTSIPKNPSGKILRKDLI
KLATSKSKL
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagttaactcacgaagtggtttctgcaactcgaataaaacattctacagcaaa
cgaacaccaatcccactcccgccgaatccatcactcgacgtcactactttcatatcttct
caagctcaccgcggccgtatcgccttcatcgacgcttccacgggcaaaaacctcacattc
tccgagctatggcgtgccgtggagtccgtcgcagattgtctctaccagatggggattcga
aagggacacgtcgtccttctcctctctccgaactcgattctattccccgtcgtttgcctc
tccgtcatgtcactcggcgcgatcatcaccaccaccaatcctctcaacacttccggagag
atcgctaaacagatcaaagattcgaacccggtcatcgccttcaccacggctcagctcctc
ccgaaaatctccgccgccgcggcgaagctcccgatcgtgctcatggacgaggaacgagtt
gactcagtcgggaaggtggggagactggtggagatgatgaagaggaagccgagcgggaac
cgagttatggagcgagttgagcaggacgacacggcgactttgctttactcttccggaacc
acggggatgagcaaaggagtgatctcgtctcaccgtaacttaatcgcgatggttcaaacc
gtcgtgaatcgattcggatctgatgatggaacacaaggagagcaacggttcatctgcacc
gttcctatgtttcacatctacggcttagctgcgttcgccactggactcctcgcttacgga
tccacgatcatcgttctctccaaattcgagatgcacgagatgatgtctgcgattggcaag
tatcaagccacgtttctgcctctcgtgcctccgattcttgtggcgatggttaacggcgct
gatcagatcaaagctaagtacgatttgagctctatgcacactgttttgtgcggcggagct
ccgttgagtaaggaagtgactgaagggttcgcggagaagtattcgacggtcaagattatg
caaggttatgggttgactgagtcaacgggaataggagcttccacggatactgttgaggaa
agccggagatacggcaccgccgggaaattgtcggcaagtatggaggggaggattgtggat
ccggttacgggtcagattcttggaccgaaccaaaccggtgagctctggctcaagggtcct
tctataatgaaaggttattttagtaacgaggaagctacgagctccactcttgattctgaa
ggatggctaagaactggagatctctgctatattgatgaagatggattcatattcgtggtt
gaccggttgaaggaactgatcaagtataagggctaccaggttgctccagctgagctagag
gctttgttgctcactcatcctgaaatcactgatgctgcttgtatcccgtttccggacaaa
gcagtggggcaattcccgatggcatacgttgtaaggaacactgggagcagcttatcagag
aagtcaataatggagtttgtagcaaaacaagtagcaccgtacaagaggatacgaaaagtg
gttttcgtaacttccataccaaagaacccttcaggcaagattttgcgcaaggatctcatc
aagctggcaacttccaaatccaagctttga
DBGET
integrated database retrieval system
