Capsella rubella (pink shepherd's-purse): 17896917
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Entry
17896917 CDS
T02984
Name
(RefSeq) chaperonin 60 subunit beta 1, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
17896917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17896917
03110 Chaperones and folding catalysts [BR:
crb03110
]
17896917
03029 Mitochondrial biogenesis [BR:
crb03029
]
17896917
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crb04147
]
17896917
Enzymes [BR:
crb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
17896917
Messenger RNA biogenesis [BR:
crb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
17896917
Chaperones and folding catalysts [BR:
crb03110
]
Heat shock proteins
HSP60 / Chaperonin
17896917
Mitochondrial biogenesis [BR:
crb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
17896917
Exosome [BR:
crb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
17896917
Exosomal proteins of other body fluids (saliva and urine)
17896917
Exosomal proteins of breast cancer cells
17896917
Exosomal proteins of colorectal cancer cells
17896917
Exosomal proteins of bladder cancer cells
17896917
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
17896917
NCBI-ProteinID:
XP_006307049
UniProt:
R0GVJ2
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MASTFTATSSIGSMVAPNGHKSDKKLISKLSSSSFGRRQNVCPRPRRSSSAIVCAAKELH
FNKDGTTIRRLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP
VENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAK
ALVTELQKMSKEVEDSELADVAAVSAGNNEEIGNMIAEAMSKVGRKGVVTLEEGKSAENN
LYVVEGMQFDRGYISPYFVTDSEKMSVEFDNCKLLLVDKKITNARDLVGVLEDAIRGGYP
ILIIAEDIEQEALATLVVNKLRGTLKIAALRAPGFGERKSQYLDDIAILTGATVIREEVG
LSLDKAGKEVLGNASKVVLTKETSTIVGDGSTQDAVQKRVTQIKNLIEQAEQDYEKEKLN
ERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKV
DAIKATLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNVKFGYNAATG
KYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPVGNPMDNSGYGY
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaacattcactgccacgtcttccattggttcaatggttgctccaaatggtcac
aaatctgataagaaacttatcagcaagctgtcttcaagctcatttggaaggaggcagaat
gtgtgccctagacccagaagatccagctctgcaattgtatgtgcagccaaggaattgcat
ttcaacaaagacggcactaccataaggagacttcaagctggtgtcaacaagctcgcagac
cttgttggtgttacacttggaccgaaaggacgaaacgttgttcttgagagcaagtatgga
tcaccaagaattgttaatgatggtgtgactgttgcaagagaggttgagctggaagaccca
gttgagaacattggcgctaagcttgtgaggcaagcggctgccaaaaccaatgacttggct
ggtgacggtacaacaacttctgttgttcttgcacaaggttttattgctgagggtgtcaag
gtggtggctgctggtgcaaaccctgttttgatcaccaggggtattgagaagacagcaaaa
gctttggttaccgagctccagaaaatgtctaaggaggttgaagacagtgaacttgcagat
gttgcagctgttagtgcaggtaacaacgaagaaattggaaatatgattgctgaagcaatg
agcaaagtgggcaggaaaggtgtggtgacccttgaggagggtaaaagtgccgagaacaac
ctctacgtcgtagaaggaatgcaatttgatcgtggttatatctccccttactttgtgaca
gacagcgagaaaatgtcagttgagtttgacaattgcaagttacttctcgttgacaagaaa
attaccaatgcaagggatcttgttggtgttttggaggatgcaatcagaggcggataccca
atattgataattgctgaagatattgaacaagaagcgttagcaactcttgttgtaaacaag
cttagaggtacattgaagattgcagctctcagagctccaggatttggagagcgcaagagc
caataccttgacgatattgccattctaactggagcaactgtgatccgagaggaagttggt
ctttcacttgacaaagctggaaaagaagttcttggtaatgcctcaaaggtcgtcctcacc
aaggagacttctaccatagtgggtgatggaagcacacaggatgcagtgcaaaagcgtgtt
acacagattaaaaatcttattgagcaagctgagcaagattatgagaaggaaaagctgaat
gagagaattgcaaagctctctggtggagttgctgtgattcaggttggagcacaaactgag
acagaactcaaagagaagaagttgagagttgaagatgctcttaatgcaacaaaggccgct
gtcgaggaaggtattgttgttggtggtggttgcactctgcttcgtcttgcttccaaggtc
gatgccattaaagccactcttgacaatgatgaagaaaaggttggagctgatatagttaaa
agagcactgagttatcccctaaaactgatcgccaagaatgctggtgttaatggaagcgtc
gttagcgagaaggtgctttccaacgataatgtgaaattcggttacaatgctgcaaccgga
aagtacgaggatttaatggctgcaggaatcatcgatccaacaaaggttgtgagatgttgc
ttggaacacgcagcttcggttgcaaagactttcttgatgtcggactgtgttgttgttgag
atcaaggaacctgaaccagttcccgtcggtaacccaatggacaactcaggatatggatac
tga
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