Capsella rubella (pink shepherd's-purse): 17897021
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Entry
17897021 CDS
T02984
Name
(RefSeq) transcription initiation factor TFIID subunit 12b isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
17897021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crb03021
]
17897021
03036 Chromosome and associated proteins [BR:
crb03036
]
17897021
Transcription machinery [BR:
crb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
17897021
Coactivators
SAGA/TFTC/STAGA complex
17897021
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
17897021
STAGA complex
17897021
TFTC complex
17897021
SAGA complex
17897021
SLIK complex
17897021
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
VPS13_N
Motif
Other DBs
NCBI-GeneID:
17897021
NCBI-ProteinID:
XP_006306911
UniProt:
R0IBG1
LinkDB
All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
MAEPIPSSSALSPKSLQSSNPMEASPASSAPPPSSSSQQQQQHMPAPPISNSVNSAASPA
MTVTTAEGVVIQNNSQPNNISSPNPTSNSNPPAGPQIPSPSPLSHPSSSSSLDQQQTQAQ
QQLNHLQQNQNQNQQLPQQQQQIMQQISSSPIPQLSQQQQQILQQQHMSPQQIPMSNYQI
AQSLQRSPSISRLSQIQQQQQQQHPGQYGNVLRQQAGLYGTMNFGGSGSVQQSQQNQQLG
NPNLSRAALVGQTGHLPLLNGAAGAAAQMNIQPQLLAASPRQKSGLVQGSQFHPGSSGQQ
LQGMQAMGMMGSLNLTSQMRGNPALYAQQRINPGQMRQQLSQQNALTSPQVQNLQRTSSL
AFMNPQLSGLAQNGQAGMMQNSLTQQQWLKQMSGITSPNSFRLQPNQRQALILQQQQQQL
PSGQLHQSSMSLNQQQISQIIHQQQQQSQIGQAQMSQSQQQQQLQQMQQQLQQQPQQQMQ
QQQQQQMQINQQQPSPRMSSHPGQKSVSLTGSQPDATQSGTTTPGGSSSQGTEATNQLLG
KRKIQDLVSQVDVHAKLDPDVEDLLLEVADDFIDSVTSFACSLAKHRKSSVLEPKDILLH
LEKNLHLTIPGFSSEDKHQTKAVATDLHKKRLAMVRALLESSKPETNASNTKESIRQVMV
NPNGPNHLLRPSASSEQLVSQTSGPHMLQHMTRY
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaccaattccatcatcatcggctctttcaccgaaatcactgcaatctagtaat
cctatggaagcttctcctgcatcctctgcacctccaccttcttcatcatctcagcaacag
caacaacacatgccagctcctccgatttcgaattctgttaattcggctgcgtctccggcg
atgactgttactacggcggaaggtgttgtcatccaaaacaattcgcaacccaacaatatc
tcctctcccaaccctacttcgaattcgaacccacccgctggacctcagatcccgtctcct
tctcctctctctcatccttcttcttcatcttctctggatcagcagcaaactcaggctcag
cagcaactcaatcatcttcagcaaaaccaaaatcagaatcagcaattgcctcaacaacaa
caacagattatgcagcaaatctcttcatctccgattccacagctatcgcaacaacagcag
cagattcttcagcagcaacatatgagcccacagcaaattccaatgtcgaattaccaaatc
gctcaatctcttcagcgatccccttctatttctcgcctcagccaaattcagcaacaacaa
cagcagcaacatccaggtcaatacggcaacgttctgaggcagcaagctggcttgtacggg
accatgaactttggcggctcaggttctgttcaacagagccagcagaatcagcagctgggt
aaccctaatttgtccagagcagctctggttggccaaaccggtcacttgccattgcttaac
ggtgcagctggagcagctgctcagatgaatattcaaccccaattattggctgcttcgccg
aggcagaagtctggcctggttcaaggatcgcaatttcatccggggagttctgggcaacag
ttacaagggatgcaagctatgggaatgatgggatcacttaatttgacctcgcaaatgaga
ggtaaccctgctctctatgctcagcagcgaatcaacccgggacagatgagacagcaattg
tcacagcaaaacgctcttacttcacctcaggtccagaacctccagagaacatcttctctc
gcattcatgaatcctcagctatcgggtctggcacagaatggacaagctggtatgatgcaa
aactccttgacgcagcagcaatggctgaagcaaatgtctggaataactagccccaattca
ttccgactccaaccgaatcaaaggcaggctctaatcttacagcaacagcagcagcaactg
ccctctggtcagttacaccaatcatctatgtccttaaatcagcagcagatatcacagata
atacatcagcagcagcaacaatcacaaataggccaggcgcagatgagccaatcccagcaa
cagcaacaattacaacagatgcagcaacaactccagcagcaaccacaacagcagatgcag
caacaacaacaacaacaaatgcagattaatcaacaacagccatctccacgaatgtcgagt
catccagggcaaaaatctgtcagcttaacgggttcacaaccagatgctacacaatcgggt
acaacaacaccaggtggtagctcaagccagggaacagaagcaacaaaccaactccttggt
aaaagaaagatacaggatctggtttcgcaggtagatgtacatgctaaactggatcctgat
gttgaagacctccttttggaggtagcagacgacttcattgattcggtgacatcttttgca
tgtagcttggctaagcatcgtaaatcatccgtattggagcccaaggatatattactccac
ctagagaagaacttgcacttgacaattcctggattctcgagtgaggataaacaccaaaca
aaagccgtagcaactgatctccacaagaagcgacttgcaatggtgcgtgctttactagaa
tcctcgaaaccagagacgaatgcaagcaacaccaaggaaagtattagacaagtgatggtg
aacccaaatggtccaaatcatctcttaagaccatcagcaagttcagagcaattggtttct
caaacgtccggtcctcacatgttgcaacatatgacacgttattaa
DBGET
integrated database retrieval system
