Capsella rubella (pink shepherd's-purse): 17897262
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Entry
17897262 CDS
T02984
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crb03400
]
17897262
Enzymes [BR:
crb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
17897262
DNA repair and recombination proteins [BR:
crb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
17897262
Prokaryotic type
17897262
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Motif
Other DBs
NCBI-GeneID:
17897262
NCBI-ProteinID:
XP_023644848
LinkDB
All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MSSSISVQTGRIRVLKKGSWQPSDQMVGPVVYWMFRDQRLRDNWALIHAVDLANRTNAPV
AVVFNLFDQFLGAKARQLGFMLKGLRQLHRQIDSLQIPFFLLQGDAKETIPNFIAECGAS
HLVTDFSPLREIRSCKDEVVKRTSDSLAIHEVDAHNVVPMWAASGKLEYSARTIRGKINK
LLPDYLIEFPKLEPINKKWAGIVDKVDWDSLIERVVREGAEVPEIEWCMPGEDAGMDVLM
GTKDGFLTKRLKNYSTDRNNPVKPKALSGLSPYLHFGQISAQRCALEARKVRNTSPQAVD
TFLEEMIVRRELSDNFCYYQPHYDSLKGAWEWARKSLMDHASDKREHIYSLEQLEKGQTA
DPLWNASQLEMVHQGKMHGFMRMYWAKKILEWTKGPEEALSISIYLNNKYEIDGRDPSGY
VGCMWSICGVHDQGWKERPVFGKIRYMNYAGCKRKFNVDSYVSYVKSLVSVTKKKRKAEE
QLTRDSINPEINNV
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcaatctctgttcaaacgggtcggatccgggtcctaaagaaaggctcatgg
caaccgtcggatcaaatggtaggtcctgtcgtttactggatgttcagagatcaacggttg
agagataactgggcgttgatccacgccgttgatttggcgaacagaaccaacgcgccggtg
gccgtcgtgttcaatttgttcgatcaatttctgggcgcaaaagcgaggcaattagggttt
atgttaaagggtttgcgccagcttcatcgccagatcgattctcttcaaattccgtttttt
ctattacagggagatgcaaaggagacaattcctaatttcattgcagaatgtggagcttca
catttggttactgatttctcgcctttacgagaaatcaggagttgtaaagatgaagttgtt
aagagaaccagtgattcattggctatacatgaggttgatgctcacaatgtagttccaatg
tgggctgcttccggtaaattggagtatagtgctagaacaatacggggtaagatcaacaaa
ctactacctgattacctcattgagtttcctaaactcgaacctataaataagaagtgggct
gggatagtggataaggtggattgggacagtctcatcgaaagagttgtaagggagggtgca
gaagttcctgagattgaatggtgtatgccgggagaagatgcggggatggatgtattgatg
gggactaaagatgggttcttgacgaaaaggttgaagaattattcaacagaccggaataac
cctgttaagccaaaagcactctctggtctctctccttatcttcatttcgggcagatatca
gctcagcgatgtgccttagaggcacgtaaagtccggaatacctcccctcaggcggttgac
acatttttggaagaaatgattgtgcgaagagaactttccgacaatttttgctactatcag
cctcattatgattctttgaagggagcttgggagtgggcacgcaagtcattaatggatcat
gcttctgataagagagaacacatttactcgttggaacagttggagaagggacagacagca
gatcctttatggaatgcttcacagttagagatggttcatcaagggaaaatgcacggtttc
atgagaatgtattgggcaaagaagattctagaatggaccaagggacctgaagaggctctc
tccatatccatctatctaaataacaagtatgagatcgatggtcgtgacccgagtggatat
gttgggtgtatgtggtccatatgcggtgttcatgatcaggggtggaaagagaggccagtt
tttgggaagatacggtacatgaactacgcaggctgcaaacggaaattcaatgtggacagt
tacgtctcttatgtcaagagtttggtgtcagtaacaaagaagaagaggaaagctgaagaa
cagcttaccagagactctattaatccggagataaacaatgtttag
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integrated database retrieval system
