Capsella rubella (pink shepherd's-purse): 17897290
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Entry
17897290 CDS
T02984
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crb03021
]
17897290
Transcription machinery [BR:
crb03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
17897290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
17897290
NCBI-ProteinID:
XP_023632821
LinkDB
All DBs
Position
Unknown
AA seq
1622 aa
AA seq
DB search
MDQSQRAVAATPSSSSRSYQFHPARAAIIDLFNLYLGRGSRQNPDESHRDHPNKSQKRVH
APNRDLPPRNEQFILDFEQLQSQFNDPEQLRTITESVLISLVVQCSNHAPRAEFLLFALR
TLCRISLINWDTFLPSLLSSVSAAEASISQGAQAAAAAAAAAGSSATSSQSLVPVSANNI
PSSSSYHSTNPTSLLPSAHGIGSPSASGNELGSVTTFAQAKSLENGQQIARASQTVRENA
MRNNQRIRAAAINSLRQLSCKIILIGVEFNLKPVTHAEIFQYMMNWLVNWDRRDLGTEDS
ARKSWRSEKTLAEWLRSCLDVIWLLVEEGESRIPFYELLRSGLQFIENIPDDEALFTLIM
EIHRRRDAMAMHMLMLDQHLHCPTFGTHRIMSQTAANVSVEAVPHFRHSPITYPSVLGEP
LYGEDLAMSIPKGSLDWERAVRCIRHAIRTTPSPDWWKRVLVVAPCYRPSSQAGPIPGAV
FTSEMICEAIIDRIVELLKLTNSDANCWQEWLVFSDIFFFLIKSGCTDFVDFIDKLVSRL
NGVDNHILRTNHVTWLLAQIIRVELVMTALNTDPKKVETTRKILSFHREDRNSDPNNPQS
VLLDFVSSCQNLRIWSLSTSTRAYLNNEQLLKGKQIDEWWRSKGERMMDYMNMDDRSIGM
FWVVSYTMAQPACETVINWLSSAGMAELPGLQPNDRVMMTQEVTPLPMSLLSGFSMNLCL
KLALQMEEALFVSQVVPSIAMVETYTRLLLISPHSMFRSHFSQLAQRNASLLSKPGVTLL
VLEILNYRLLPLYRYQGKSKTLMYDVTKIISALKGKRGDHRIFRLAENLCMNLILSLRDF
FSVKREGKGPTEFTETLNRITIMTLAITIKTRGIADADHLVYLQTMLEQILATSQHTWSE
KTLRHFPSLIRDTLIGRVDKRGLSIQAWQQAETTVINQCTQLLSPSAEPAYVVTYLGHSF
PQHRQYLCAGACLLMQGHADNINSANLARVLREVSPEEVTANIYTLVDVLLHHIHVDLQQ
GQSLEAVLDKAGANLAFFFWTHEMLPLDIFLLALIDRDDDPHALIIAMNLLRTPDLLLRI
KNYCQNRGSPEHWLVTQVFKRNELQKALGNHLSWKDRYPTFFDDIAARLLPVIPLVVYRL
IENNAMEQADNLLLQHSHFLAYHPLRFTFVRDILAYFYGHLPGKLVLRMLKVLDLSKIPF
SESFPQYISPAGAAVCPPLDYFATLLLNLVNNVIPPLSSSSNCSSRSGSMADILNSSARP
PHGKTPGTSQPGPANASEGQKAFYQIQDPGTYTQLVLETAVIEILSLPVSAAQIVSSLVQ
IIVNIQSTLIQSGNGFHGAANGVGQGSVLPTSPSGGSTDSMSASRSTCLIPGINTASFVS
RSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYLEASRVIRETWWLKDGKRSQGELDSAV
GYALMDPTWAAQDNTSTAIGNIVALLHAFFSNLPQEWLDGTNAIIKNLRPVTSVAMLRVV
FRIMGPLLPRLANTHTLFNKTLTLLLTALVDVFGKNAQTTAPVEASQIADLIDFLHHIIH
YEGQGGAVQTSSKPRPDILVLIGRAADSLRPDVQHLLAHLKTDPNSSIYAAAHQNTAKTN
TS
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atggatcaatcgcagcgagcagtcgctgctacgccttcgtcgtcttctcgatcgtaccaa
ttccaccctgctcgtgctgcaattatcgatctcttcaatctctacttagggagaggaagc
cgtcaaaatcccgatgagtctcaccgagatcatccgaacaaatcacagaagcgtgttcat
gctccgaatagagacctgcccccgagaaacgagcaattcattttggattttgagcagctt
cagagccagttcaatgatccagagcaactgaggacgattacggagtcagttttgatatct
ctggtggtgcaatgtagtaatcatgcgcctcgtgctgagtttcttctctttgccttgcgt
acattgtgtaggattagtcttatcaattgggatacttttttgccatcccttctctcttcg
gtttctgctgctgaggcgtcgataagtcaaggtgctcaagcagcagcagcagcggcggca
gcggctggttcttctgctacttcatcacagtctttagttcctgtatctgcaaataatatc
cctagctcgtcaagttatcattccaccaatccaacgtcgttgttgccttcagctcatggt
attggttctccatcagcttcagggaatgagctgggttccgtaactactttcgcacaggct
aaatctttggagaatgggcagcagattgcaagggcaagccagactgtaagagagaatgct
atgagaaataatcaacggataagagctgctgctataaacagtctgcgccagctcagttgc
aagattatcttgattggcgttgaatttaatctcaaacccgttactcatgccgagattttc
cagtatatgatgaattggcttgtgaactgggacaggagagatctgggaactgaggactct
gctagaaaatcgtggagatctgagaagactttagctgaatggttacggagttgtttggat
gtgatctggcttttggtagaagagggtgaatctcgaattccgttttatgagttattgcgc
agcggtctacagtttatagagaacataccggatgatgaagccttgttcactcttatcatg
gagatacaccggaggcgagatgcaatggccatgcacatgctcatgttagaccaacatctt
cactgtccaacatttggtacccatcgtataatgtcccaaacagctgccaatgtttcagtc
gaagctgtgccacactttcgacattcaccaattacttatccaagtgtgcttggggaacct
ttgtatggagaggatctggcaatgtctattccaaaaggaagccttgattgggagagagca
gttcgttgcattagacacgctattcgtactacgccgtcaccggactggtggaagcgtgtt
cttgttgtggccccttgctatagaccatcatcacaagcagggcccatccctggtgctgtt
tttacttctgagatgatttgcgaggcaattattgacaggattgttgagcttcttaagcta
accaactcagatgcaaattgctggcaagagtggctggttttctcggatattttcttcttt
ctaatcaaaagtgggtgtactgattttgttgatttcattgataagttggtttcacgcctt
aatggtgttgataaccatattcttcggacaaatcatgtgacgtggctgcttgcacaaata
atacgcgtggagcttgtgatgactgctttgaacacagatcctaaaaaggtggagactact
aggaagatcttatcatttcacagggaagatagaaattctgatcccaataatcctcagagt
gtgttgcttgacttcgtaagcagttgtcagaatctacggatttggtcactaagcacaagt
actagggcatacctaaacaatgaacagctgttgaagggaaaacaaatcgatgagtggtgg
agaagcaaaggagagcgcatgatggattatatgaatatggatgataggtcgattggcatg
ttttgggttgtttcctacaccatggcacaaccagcatgtgaaacagttataaattggtta
tcttcagctggcatggctgagttgccgggattacagccaaacgacagagtaatgatgacg
caggaagtgacaccgttacctatgtcattgctatctggcttttcaatgaatttgtgcttg
aaattggcccttcagatggaagaagctttgtttgttagccaggttgttcctagcattgca
atggttgagacatacacaagattgctgctgatttcccctcactcgatgttccgttcacat
ttcagtcaattggcccagcgaaatgcttctctactaagcaagcctggggtgacgttgctt
gttctagagattctgaattatcgtttgcttccgctctacagataccaaggaaagagtaaa
actttaatgtatgatgttactaaaataatctctgcattgaaaggaaaacgtggtgatcac
cgtatattcagactagctgaaaacttatgcatgaatctcattttatcactcagagacttt
ttctctgtgaaacgggagggaaaagggccaactgaattcactgaaacattaaaccgcata
accatcatgactcttgctatcacaatcaaaacacgtggtattgcagacgctgatcatttg
gtttacctgcaaaccatgttggaacaaatacttgcgacgagtcagcatacatggtcagag
aaaacgctgcgacatttcccatcccttatccgtgatactttaattggacgagtagacaag
aggggactatcaattcaggcgtggcaacaggctgagacaactgtgataaaccagtgcact
cagcttctctcaccatctgctgaacccgcgtacgttgtgacatacctcggtcacagtttc
cctcaacaccgtcagtatctatgtgctggtgcttgtctgctgatgcaaggtcacgctgat
aacatcaacagcgcaaatctggcacgggttctgagagaagtttctcctgaagaagtcact
gctaacatatacactttggttgatgttttgcttcaccacattcatgtagaccttcagcaa
ggacaatctttagaggcagttctagataaggcaggcgcaaatcttgcatttttcttctgg
acacatgaaatgcttcctctcgacatttttcttttggcgctcattgaccgtgatgacgat
ccgcacgccttgataattgcaatgaacctacttagaacgccagaccttctgctgaggatt
aaaaactactgccaaaaccgtggatctcctgagcactggcttgtcacacaggtgttcaaa
cgcaatgaactccagaaggcccttggtaaccatctttcttggaaggataggtacccaacg
ttctttgatgatattgcagcgcgtttgcttccagttatccctctagtggtctacaggctc
attgagaacaatgcgatggagcaagctgataatcttttgcttcaacactcgcattttcta
gcttatcatcctctcagattcacgtttgtccgtgacatactcgcttacttctatggtcat
cttcctgggaaacttgtcctgcgcatgcttaaagtacttgatctcagcaagattccattc
tctgaatcgttcccgcagtacattagccctgctggtgccgctgtatgcccacctttagat
tactttgccactcttctgcttaatctcgtaaacaacgttatacctccacttagcagcagc
agcaactgcagctcgaggtctggctcaatggcagacatcttaaacagctcagcaagacct
cctcatggaaaaactccaggaacatctcagcctggaccagcaaatgcctctgagggccag
aaagcattctatcagatccaggacccaggaacttacactcaattggttcttgagacagcc
gtgatcgagatcctctcgcttcccgtctctgctgctcagattgtctcttcgcttgtccag
ataattgtcaacatacaatcgactctcattcaatctggaaatgggttccacggtgctgca
aacggggtggggcaaggttcagtgctgccaacgtctccctcaggagggagcacggactcc
atgagcgctagccggtccacttgtctgattcctggtatcaacacggcgagctttgtctct
agaagcggttatacatgtcagcaactgtcgtgtctgttgatacaagcttgtgggcttttg
ctggctcagctccctccagattttcacatgcagctttacttggaggcatcacgtgtgata
agggaaacatggtggcttaaggatgggaagagatcacaaggtgaactagactcggctgtt
ggctacgctttgatggatcctacatgggctgctcaggacaacacctctactgccatagga
aatatagtcgccttgcttcatgccttcttcagcaacctcccacaagaatggcttgatggc
acgaatgccatcatcaagaatctccggcctgtgacatctgtcgcaatgctcagagttgta
ttccgtattatggggccactgcttccgaggcttgccaacacacatacgctctttaacaag
acgctaacccttctcttaaccgcgttggtcgatgtttttggaaagaacgcacagacaaca
gcccctgttgaagcatcccagatcgcagatcttattgatttcctacaccatattattcac
tacgagggacaaggaggagctgttcaaactagcagcaagccgagaccagacatcttggta
ttaatcggaagagcagcagactctctccgaccagatgtacaacaccttctcgctcacctc
aaaaccgaccccaattcttcgatatacgcagctgctcatcagaatactgcaaagaccaac
acctcttaa
DBGET
integrated database retrieval system
