Capsella rubella (pink shepherd's-purse): 17897333
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Entry
17897333 CDS
T02984
Name
(RefSeq) ATP-dependent DNA helicase Q-like 5 isoform X1
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crb03032
]
17897333
03400 DNA repair and recombination proteins [BR:
crb03400
]
17897333
Enzymes [BR:
crb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
17897333
DNA replication proteins [BR:
crb03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
17897333
DNA repair and recombination proteins [BR:
crb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
17897333
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
17897333
NCBI-ProteinID:
XP_006303902
UniProt:
R0IEU5
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MDSDSDSDGSHVSATPPRLSPPSPPRPPPKYVPLVSRKITSSTSRSNPKAPTHPPPNAPL
PSSSTPPTPPPPPSPLFTNLPFRICESRPATFSSSFSVSSFSRLRSRASFTSDEKLKSDG
VDFVPDPPQVVVVNAPPKPVRRKPPNLITDTITSPSVKPPVFRTTGNGEGNFVKLNLNGK
RGKKFPSKYKGVSKSRSNYAFRGKRYKKKEADGEGEPLLEEESDLQKQIEDEANGFISSV
EDAILAVKTEASDDNLTTLLNLVYGYDSFRDGQLQAIKMVLGGSSTMLVLPTGAGKSLCY
QIPAMILPGITLVVSPLVSLMIDQLKHLPSIIKGGLLSSSQRPEEATETLRKLKEGIIKV
LFVSPERLLNVEFLSMFRMSLSVSLVVVDEAHCVSEWSHNFRPSYMRLKASMLFSELKAD
CILAMTATATTMTLQAVMSALEIPSTNLIQKSQLRDNFELSVTMSGANRMKDLLILMESH
PYKEIRSIIVYCKFQYETDMISKYLRDNNINAKGYHSGLPAKDRVRIQESFCSNKIRVVV
ATVAFGMGLDKGDVGAVIHFSVPGSLEEYVQEIGRAGRDGRLSYCRLFYDNDTYLKLRSL
SHSDGVDEYAVGKFLTHVFSTETKQHEKIRSLVIESASHKFDMKEEVMQTILTHLELGEV
QYLRMFPQLNVCCTLNFHKSSPDTLAARNTIVAAILKKSHVKQGLHVFDIPAVASSIYVA
TTDVLAEIQALKMKGEVTYELKDPAFCYTILKLPKEICSLSSHLTKWLTEIESCKVRKLD
IMSSAAVAAINVSSTSELSFGAKQTLSLQTRILDYFNGDEKCDTPSKTTQNCAFLRADIK
VFLQSNRQAKFTPRAIARIMHGVGSPAFPNSVWSKTHFWGRYMSVDFRVIMEAAQTELLN
FVDRNAALAT
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggattccgattcagactccgatggttctcatgtctccgccacccctccccgactctca
ccgccatctcccccgcgaccaccgcctaagtatgtgccactggtctcccggaaaattacg
tcttctacctctcgctcgaatcccaaagcacctactcacccgcctccgaatgctccacta
ccgtcttcctctactcctcctactcctcctcctcctccatctccattatttaccaatctc
cctttccggatctgcgaatcccgacccgctacgttttcttcttctttttccgtatcgtcc
ttttccagactccgcagcagagcttcttttacatctgatgagaaactcaaatcggacggt
gtcgattttgtgccggatccacctcaggtggttgtagtgaacgcccctccaaaacccgtt
aggcgaaagcctcctaatctcatcaccgatactataacttctccgtcggtgaagcctccg
gtgtttcgtaccaccggtaacggcgagggtaatttcgtgaaattgaacttaaatggcaag
agagggaagaagtttcccagcaaatacaagggcgtctccaaatctagaagcaattacgct
ttcagagggaagagatacaaaaagaaagaagctgacggtgaaggcgaacccttgttggag
gaagagtctgatttgcagaaacagatagaagatgaagctaatggttttattagctctgta
gaggatgcgattcttgctgtgaagactgaggcttctgatgacaatctgacgacgctgttg
aatttagtgtatggttatgattcttttcgagatggccagttgcaggcgatcaagatggtt
cttggtgggagttcaacgatgctggtattgcctactggtgctggtaagtctctctgctac
cagattccggcaatgattcttccgggaatcacgcttgttgtgagtcctttggtttcgttg
atgatcgatcagttgaagcatttgccttcaattattaagggtggtctcttgagcagcagc
cagagacctgaggaagcaacagaaacattgcggaaacttaaagaaggcataataaaggtc
ctctttgtatctcccgagagacttctgaatgtagaatttttgtcaatgtttcgcatgtct
ttatctgtgtcacttgttgttgtggatgaggcacattgcgtatcagaatggtctcataac
ttccgcccttcatatatgagactcaaggcatcaatgctgttttctgaactcaaagcagat
tgtattcttgcaatgactgcaaccgccactaccatgactcttcaagctgtcatgtctgca
ctagagataccgtcaaccaatcttattcagaagtcacagctgagagacaattttgagctg
tctgttacaatgagtggagctaacagaatgaaagatctattgattttgatggagtctcat
ccatataaggagattagaagcatcattgtgtactgcaaatttcagtatgaaactgacatg
ataagcaagtatttacgcgataacaacatcaatgcaaagggttatcacagtggtcttcct
gcgaaggaccgtgttcgcatacaggagtcattttgttccaacaagattagagtggttgtt
gctactgtggcattcggcatgggacttgacaagggagatgttggagctgtaatccacttc
agcgtgccaggaagtttggaagaatacgttcaggaaattggacgtgctggtcgcgatggg
cggttgtcttattgccgtctcttttatgataatgacacatatctaaagcttcggagtctt
tcacacagtgatggtgtcgatgaatatgcagttggaaaatttctcacccatgtgttttcc
actgaaacaaagcaacatgagaagatacgctcactagtcattgaatctgcctctcataaa
tttgacatgaaggaagaggttatgcaaacaattttgacacatttggagctgggagaagtg
caatacctacgtatgtttccacaacttaacgtctgttgcactttgaatttccacaagtct
tctccagacactctggctgcacgaaataccatagttgcagcaattctgaagaagtctcac
gtgaagcaagggttgcatgtcttcgatataccagctgtggcctctagtatatatgttgca
acaacagatgtcttggctgagattcaagctctgaagatgaagggggaagtaacttacgag
ttgaaggaccccgccttttgttacacaatcttaaaactcccaaaggaaatatgttcattg
tccagtcatcttaccaagtggctcacagagattgaaagttgcaaagtgagaaaactggat
attatgtctagtgcagcggtggctgcgataaatgtttccagcacttcagaacttagtttt
ggtgccaagcaaacactgagcctgcaaaccagaattttggattacttcaatggtgacgaa
aagtgtgacactccgagcaagacgactcagaattgcgcctttctacgagcagacataaag
gtgtttttgcagagtaatcgccaggccaaattcaccccaagagccatagcaagaataatg
catggagttggaagtccagcttttccaaattcagtctggtccaagactcatttctgggga
aggtatatgagcgtagacttccgtgtgataatggaagcggcacaaacagagcttctcaat
tttgtagacagaaatgctgctttagctacatag
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