Capsella rubella (pink shepherd's-purse): 17897502
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Entry
17897502 CDS
T02984
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00040
Pentose and glucuronate interconversions
crb01100
Metabolic pathways
Module
crb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
17897502
Enzymes [BR:
crb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
17897502
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
17897502
NCBI-ProteinID:
XP_006306433
UniProt:
R0GU53
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All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MTKPTITFPLLFTLLITFISVSSSASNAFNVVSFGAKPDGVTDSTAAFLKAWQGACVSAA
SATVVVPKGTFLLKAITFGGPCKSKITFQVSGTVVAPADYRAFGNSGYWILFNKVSKMSL
VGGTFDARANGFWSCRNSGQNCPPGVRSISFNSAKDVIISGVKSMNSQVTHMTLNGCTNV
VVRNVRLVAPGNSPNTDGFHVQFSTGVTFTGSTVQTGDDCVAIGPGTRNFLITKLACGPG
HGVSIGSLAKDLKEDGVENVTLSSSVFTGTQNGVRIKSWARPSTGFVRNVFFQNLIMKNV
QNPIIIDQNYCPSHQGCPSEHSGVKISQVTYKNIQGTSATQQAMKLVCSKSNPCTRITLQ
DIKLTYSKGAPATSYCFNAAGKSLGVIQPTSCLNR
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacctactataacttttccacttctcttcacacttctgatcaccttcatcagt
gtatcgagcagtgcctccaacgctttcaacgtagttagcttcggggccaaaccggacggg
gtcaccgattccaccgcagcattcctcaaagcatggcaaggggcttgtgtctcggcagct
tcagccacagtggtggtcccgaagggaacattcctgttgaaggcaataacgtttggaggg
ccatgcaagagtaaaatcacatttcaagtgtccggaaccgtcgttgctccggcagattac
agggcctttggcaactctggttactggattctcttcaacaaggtcagcaaaatgtcactt
gtcggcgggaccttcgacgctcgagctaatggtttctggtcttgccggaattctggtcag
aattgccctcccggtgttaggtcaatatcgttcaactcggcaaaagacgtgatcattagt
ggagtgaaatccatgaacagccaggtcacccatatgaccctcaatggttgcaccaatgtg
gtcgtccgtaacgtcagactagtggctccgggaaacagcccaaacaccgacggtttccac
gttcaattttccaccggtgtcacattcaccggaagcaccgttcagactggagacgactgt
gttgctatcggccctggtacccgcaacttcctcatcaccaaacttgcttgtggcccaggt
cacggggtgagtattgggagcttggcgaaagatttgaaagaagacggagtagagaacgtg
acactatcgagttctgtatttacgggaacacaaaacggcgtgaggataaagtcgtgggcg
aggcctagcaccggattcgttagaaacgtcttcttccaaaacctaatcatgaagaacgtc
caaaaccctatcataatagaccaaaactattgtccttctcaccaaggttgcccttctgag
cattccggagtgaagattagccaagtgacgtataagaacatacaaggaacgtcggcgaca
cagcaagcgatgaagctggtgtgcagcaagagcaatccatgcacaagaatcacattacaa
gacataaagcttacttacagcaaaggagcccctgctacttcctactgtttcaatgctgct
gggaaaagtcttggtgtaattcaaccaactagttgtctaaaccgataa
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