Capsella rubella (pink shepherd's-purse): 17897685
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Entry
17897685 CDS
T02984
Name
(RefSeq) oligouridylate-binding protein 1B isoform X2
KO
K13201
nucleolysin TIA-1/TIAR
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17897685
03041 Spliceosome [BR:
crb03041
]
17897685
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
17897685
Spliceosome [BR:
crb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
17897685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
17897685
NCBI-ProteinID:
XP_006307635
UniProt:
R0IT33
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MQRLKQQQQQVMMQQALMQQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNI
HIQVTEPLLQEVFASTGPVESCKLIRKDKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPI
KVNWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFNCFSVYPTCSDARVMWDQKTGRSRG
FGFVSFRNQQDAQTAIDEIGGKWLGSRQIRCNWATKGATSGEEKQSSDSKSVVELTSGVS
EDGKDTSNGEAPENNAQYTTVYVGNLVPEVSQVDLHRHFHSLGVGVIEEVRVQRDKGFGF
VRYSTHAEAALAIQMGNTHSYLSGRQMKCSWGSKPTPPGTASNPLPPPGPAPIPGFSASD
LLAYERQLAMSKMAGMNPLMHHPHGQHALKQAAMGATGSSQGMYDGGFQNGQQLMYYQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggttgaagcagcagcagcaacaagttatgatgcagcaagctcttatgcagcaa
caacagtctctctaccatcctggtctcctcgccgctcctcagatagaaccaatcccaagt
ggaaatcttccccctggttttgatccaagtacttgccgcagtgtgtacgttggaaacatc
catattcaggtgacggaacctctgctccaagaggtgtttgctagcactggtcctgttgaa
agctgtaaactaattaggaaagacaagtcttcttatgggtttgtccactactttgatcga
agatcggctggtcttgccatcctttctctcaatggaaggcatttgttcgggcaacctatc
aaggttaactgggcttatgctagtggccagagggaggatacttcaagtcacttcaatata
tttgttggggatttgagtccggaggttactgatgccatgctgtttaattgcttctctgtg
tatccgacttgttcggatgcaagagttatgtgggatcagaagactggacgttcacgagga
tttggatttgtttcgttccggaaccaacaggatgcccagactgcaatagatgaaattggc
gggaaatggcttggatcgagacagatacgttgcaactgggcgacaaaaggagccacttct
ggtgaggagaaacaaagttctgattccaaaagtgtcgtggaactaaccagtggtgtctca
gaggatggtaaagatactagtaacggtgaagctcctgagaacaatgctcagtacacaact
gtttacgttggcaatcttgttccagaggtttcccaggttgatcttcaccgccactttcat
tcccttggtgttggggtcattgaggaagtccgtgttcaaagagataaaggttttggattt
gtgagatactctactcatgcagaggcagcccttgctattcagatgggaaatacacattcc
taccttagtggcaggcaaatgaagtgttcttggggaagcaagccaactccaccagggaca
gcttcaaatccgcttcctcccccaggtcctgcgccaatcccgggattctcagccagcgat
cttttagcttacgagaggcaactagcgatgagcaagatggcaggaatgaatccgctgatg
catcacccacatggacaacatgctcttaagcaggctgcaatgggagccactggttcaagc
cagggaatgtatgacggtggtttccagaacgggcagcagctcatgtactaccagtga
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