Capsella rubella (pink shepherd's-purse): 17897693
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Entry
17897693 CDS
T02984
Name
(RefSeq) protein CHROMATIN REMODELING 20
KO
K10779
transcriptional regulator ATRX
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crb03000
]
17897693
03036 Chromosome and associated proteins [BR:
crb03036
]
17897693
Transcription factors [BR:
crb03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
17897693
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
17897693
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ADD_ATRX
ADD_DNMT3
Motif
Other DBs
NCBI-GeneID:
17897693
NCBI-ProteinID:
XP_006304461
UniProt:
R0I4Y9
LinkDB
All DBs
Position
Unknown
AA seq
1469 aa
AA seq
DB search
MKENEEKTKGRDEHPEGKEHTVEAKEDGMDITDEKMEAEQEMMEGKLEEVKSIDERGEYH
DVQMEENNNQDEQKDEELQVSDSISESSDFSSDEDEQLQSGRDDELDLEKPLSEEEIEEL
ISDFMGVESKASDAQEALEKESLSKVESEVRNELSETLHGDELNKAVAAEMMTFKDEWEA
TLDELETESANLLEQLDGAGIELPKLFERIERDAPNVCYTEAWKQRAHWAGTQVTKETVE
SLANAERFLHTHRPVRKRHGKLLEEGASGFLEKKLADGDVKESLCGTSELDWSSLNKVFS
EKRDESISFGSKHWASVYLASTPQQAAAMGLEFPGVNEVEEIEEIDASLADPFLADAIEN
ERELPLSEEQKKNYIRVKEEDDLNSDLEHQLRLKRKRRKKRSNQVIRCAAESMDDDCVIL
DGNSINPKSAEARAKSPETSNHVHNKDVNKVENGNLSNSDIDTMTDDSANNFRCTACNNV
AVEVHSHPLLEVIVCMDCKRSIEDRVAKVDDSLERRCEWCGHITDLIDCRTCEKLFCASC
IKRNIGEEYLPEAQSSGWDCCCCSPIPLRRLTLELEKAMRYKKTIDLSSDSSSDSSSDSS
SDNNSADTDADVNVAISSKKKSKKKIRRIIDDAELGKDTRRKIAIEKERQERLRSLQFSA
RYKTISSMGDVKSIPEGAEIEVLGDAHSGYIVNVAREIGEEAVRVPCSISAKLKVHQVTG
IRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDLGLKTALIVT
PVNVLHNWRSEFMKWRPSEVKPLRIFMLEDVSRERRLDLLKKWRNKGGVFLMGYAAFRNL
SLGRGVKDLNAAREICSALRDGPDILVCDEAHIIKNTRADTTQALKQVKCQRRIALTGSP
LQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAEDVKIMNQRSHILYEQ
LKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRKLYKRFLRLYGFSDGRADEKMRKNFF
AAYQVLAQILNHPGIPQLRREDSKNGRRGSIVDIPDDCSSEENIDYNMVTGEKQRTMNDL
QDKVDGYLQKDWWVDLLQKNNYKVSEYSGKMILLLDILSMCADVGDKALVFSQSIPTLDL
IELYLSRVSRNGKQGKFWKKGKDWYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRA
GSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQ
VTKEGLAARVVDRQQVHRTISKEEMLHLFEFDDDDEKTEAVTERSKQNEATQSNLMENSQ
KPKATLSRVVCDKLMENLLQRHGPNWISSFHEHETLLQENEDERLTKEEKDMAWEVYRRA
LEWEEVQRVPLSESSVLPKPSPSIQTEPLPMPKGFNRSRFVNRNCTRIAHQLTLISQGIK
LGSSTFCGECGIVLTWADFRPASKTSEVN
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaaatgaagaaaaaacgaaaggaagagatgaacatccagagggaaaggagcat
acagtggaggcaaaagaggatgggatggatataacagatgaaaaaatggaggcagaacaa
gagatgatggagggaaagcttgaagaggtgaaatcaatagatgaaagaggggagtaccat
gatgtacagatggaagaaaataacaatcaggatgagcaaaaggatgaggagctgcaagtc
tctgatagcatatctgaaagttctgatttcagttcagatgaagatgaacaattgcagtca
gggcgtgatgatgagttggatcttgagaaacctctgagcgaggaagaaatagaagagtta
atttcagattttatgggagttgagagtaaggcgtcagacgctcaagaagcacttgaaaag
gagtctctttctaaagtagagagtgaagttaggaacgaattatcagaaacactccatggt
gatgagttgaataaagctgttgctgctgaaatgatgacttttaaagatgaatgggaggca
actcttgatgagcttgaaacagaaagtgcaaacttgttggagcaacttgatggtgctgga
atcgagcttccaaaattattcgaaagaatagaaagggatgcccctaatgtttgctacact
gaagcttggaaacaaagagcccactgggctgggactcaggtgacaaaagaaactgtggaa
tcattggctaatgctgagaggtttcttcacactcaccggcctgtccgaaaacgacatgga
aaacttttggaggagggggctagtggttttctggagaaaaagcttgctgatggtgatgtt
aaagaatctttgtgtggaacatctgagcttgactggtcatctctaaacaaagtgttttcg
gaaaaaagggatgagtctatttcctttggtagtaagcattgggcgtctgtttacttggca
agcactccacaacaagctgcagccatgggattagaatttccaggagtcaatgaggtggag
gaaatcgaagagattgatgcaagcttggcagatccatttttggccgatgcaatagaaaat
gaaagagaacttcccctctccgaagaacaaaagaaaaattatatacgagtcaaagaagag
gatgatttaaatagtgatcttgaacatcaacttcgtttgaagcggaaaagacgcaagaaa
agatcgaatcaggttatcaggtgtgcggcagagagtatggatgatgattgtgtgattttg
gatgggaactctattaacccaaaatctgctgaagcccgagctaaaagtcctgagaccagc
aatcatgttcataataaggatgtcaacaaagtggaaaatgggaatttgtctaattcagat
atagataccatgacagatgattcagcaaacaattttaggtgtactgcctgtaataacgta
gctgtggaagtgcatagtcacccccttctagaagttatagtttgcatggattgcaaacgt
tcaattgaagatagagttgcgaaggttgatgactctttggaacgtcgttgtgaatggtgt
ggtcatattactgacttaatagattgtaggacatgcgaaaaacttttctgtgcatcatgc
ataaagaggaatattggtgaagaatacttgcctgaagctcaatcctctggttgggattgt
tgttgctgctctccaattcccttgcgaagattgacacttgaactggagaaagccatgagg
tataagaagacaatagacttgagctctgattctagctctgattctagctctgattccagc
tctgataacaattctgctgatacagatgccgatgttaatgtagcaatcagctcaaagaag
aaatcaaagaagaaaattcggcggataatcgatgatgctgaattagggaaagacacgaga
agaaaaattgcaattgaaaaggaacggcaggagcgtcttaggtccttgcagttttctgcc
agatacaaaacaattagctctatgggagatgtgaaatctattccagaaggtgcggaaatt
gaggttcttggtgatgctcacagtggttacatagtaaatgttgctagggagattggtgaa
gaagctgtgagagttccttgtagtatatctgccaaactaaaagtccatcaggtaacaggg
ataagatttatgtgggaaaatattattcagtctatcagtagagtaaagtctggtgataaa
ggtcttgggtgcattctagctcatacaatgggcctgggcaaaacttttcaggttatagcg
ttcttgtacaccgcaatgagatgtgttgatttggggctgaaaactgctcttattgtgact
cctgtaaatgtgttgcacaattggcgaagtgaatttatgaagtggaggccttcagaagtg
aaaccacttcgcattttcatgcttgaagacgtttcaagggaaaggagattggacttgcta
aaaaagtggcgaaataagggtggagtcttcttgatgggatatgcagcttttagaaacctg
tctcttgggaggggggtgaaggatttgaatgcggccagagagatctgtagtgccttgagg
gatggacctgatatacttgtttgcgatgaggctcacattattaagaataccagggctgac
acaactcaagcattgaagcaagttaaatgccagagaagaattgccttaactgggtcaccc
cttcaaaataatctcatggaatattattgtatggttgattttgtcagagaaggatttttg
gggagtagccctgagtttagaaatcgcttccaaaatccaatagaaaacggacagcatatg
aattcaactgcagaggatgtaaaaattatgaaccagagatcacacattctgtatgagcaa
ttgaaaggatttgtgcaaagaatggacatgaatgtggtgaaaaaggatctgccacctaaa
acagtcttcgtaatatctgtcaagctatcgcccttgcagcggaaactgtataagagattt
cttaggctgtatgggttcagcgatggaagagctgatgaaaaaatgagaaaaaactttttt
gctgcttaccaggtcttggctcagattttaaatcatccagggattccgcaattaagaaga
gaagatagcaagaatggtcgtcgtggtagcattgttgatattccagatgactgttcaagt
gaagaaaatatagactacaacatggttacgggagagaaacaaagaactatgaatgatttg
caggataaagttgatggctacctccaaaaggattggtgggtcgacctacttcaaaaaaat
aattataaggtgtcggagtatagtggcaaaatgattttgctattggatattttatccatg
tgtgctgatgtgggggataaggcgcttgtgtttagccagagtatcccgactttggatctc
atagaactttatctttcaagagtatctcgaaatggaaaacaaggaaagttctggaaaaag
gggaaagactggtacagaattgatggaaaaactgaaagctcagagcgacaaaagttggtt
gataggtttaatgagcctgataacaaaagggtgaaatgcactttaatttcaaccagagca
ggatcccttggaattaatctttatgctgctaaccgtgtgattatcgttgatggttcatgg
aatccaacctatgatcttcaagctatatttcgagcttggaggtatggtcaaaagaaacca
gtatttgcgtacaggttgatggcacgtgggactattgaagaaaagatatataaacgtcag
gtgactaaggaggggttagctgcgagagtggtcgatagacaacaagtgcacaggactatc
tccaaagaagagatgttacatctttttgaatttgacgatgatgatgagaaaactgaagcc
gtgactgagagaagcaagcaaaacgaagcgactcaaagcaatctgatggagaattcacag
aagccgaaggccaccttatctcgtgttgtctgcgacaaattgatggagaacttactacag
agacacgggccaaactggatttccagtttccatgagcacgagacattgctacaagagaat
gaagacgaaagactgacaaaggaagaaaaagatatggcctgggaagtttacagaagagca
cttgaatgggaagaagttcagcgggtccctcttagtgaatcttcagtgctcccaaaacct
tctccttccatacaaacagaaccgttacccatgcctaaggggttcaacagaagtcgtttt
gtgaaccgcaactgcactagaattgcccaccagcttacactcataagccaaggaataaaa
cttggtagtagcacattctgtggggagtgtgggatcgttttaacatgggcagactttaga
cctgcatctaaaacttcagaggtaaactaa
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integrated database retrieval system
