Capsella rubella (pink shepherd's-purse): 17897708
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Entry
17897708 CDS
T02984
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03030
DNA replication
crb03410
Base excision repair
crb03420
Nucleotide excision repair
crb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
17897708
03410 Base excision repair
17897708
03420 Nucleotide excision repair
17897708
03430 Mismatch repair
17897708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crb03032
]
17897708
03036 Chromosome and associated proteins [BR:
crb03036
]
17897708
03400 DNA repair and recombination proteins [BR:
crb03400
]
17897708
DNA replication proteins [BR:
crb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
17897708
DNA Replication Termination Factors
ELG1-RFC complex
17897708
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
17897708
DNA repair and recombination proteins [BR:
crb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
17897708
Check point factors
HRAD17(Rad24)-RFC complex
17897708
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA_lid_RFC1
Rad17
RuvB_N
Mg_chelatase
AAA_11
AAA_14
AAA_16
AAA_5
SLFN-g3_helicase
nSTAND_NTPase5
ResIII
DEAD
AAA_24
nSTAND3
PhoH
AAA_2
AAA_28
AAA_assoc_2
AAA_19
AAA_7
AAA_30
RNA_helicase
AAA_18
AAA_25
NB-ARC
Parvo_NS1
DUF815
NPHP3_N
TIP49
DNA_pol3_gamma3
Motif
Other DBs
NCBI-GeneID:
17897708
NCBI-ProteinID:
XP_023645777
LinkDB
All DBs
Position
Unknown
AA seq
339 aa
AA seq
DB search
MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETADCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNYRQGGYPCPSFKIII
LDEADSMTEDAQNALRRTMETYSKVTRFVFICNYISRIIEPLASRCAKFRFKPLSEEIMT
HRILHICNEEGLNLGGEALSTLSSISQGDLRRAITYLQSGARLFGSTITSTDLLNVSGVV
PLEVVNKLFAACKSGDFDIANKEVDDIVAEGYPASQVINQLFDIVVEADNDITDMQKAKI
CKCLAETDKRLVDGADEYLQLLDVASNTICALSEMAQDF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagttcttcagagctcacagccatgggttgagaaataccggccgaagcaggtt
aaggacgtggctcaccaggaagaggtggttcgggtcctcaccaacactctcgagacggct
gattgcccgcacatgctcttttatggaccgccaggaaccggaaaaaccactactgcactt
gccatcgcccaccagctatttggacctgaactatacaagtctagggtgttggagctgaat
gcgagtgatgacagaggcattaatgttgttcggacaaagatcaaggattttgctgctgtt
gctgttgggtctaattaccgtcaaggcggttatccatgcccatcgtttaagatcatcatt
ctagatgaggcggattcgatgacagaagatgctcagaatgccttgaggcgcacaatggaa
acttactccaaagtcaccagattcgttttcatctgtaattacataagcaggatcatagag
cctcttgcttccaggtgtgcaaagttcagatttaaaccactttctgaagaaatcatgact
caccgtatattacatatttgtaatgaagaaggtctcaaccttggtggagaggctctttca
actttgagctccatatcacaaggggatctccgtagggccatcacatacctgcagagtggg
gctcggttgtttggatcaacaataacttctacagatttactcaatgtgtctggggtagtt
cccttggaggtagtcaataaactttttgctgcatgcaaaagtggtgatttcgatattgca
aacaaggaagtggatgacatagttgctgaaggatatcctgcatctcaagtcatcaatcag
ctatttgatatagttgtggaggctgacaatgacataacagacatgcaaaaggctaagatc
tgcaaatgtttagctgaaactgataagcgacttgtagatggggcggatgagtacttgcag
cttcttgatgtggcaagcaatacaatttgtgccctctcagaaatggctcaagacttctaa
DBGET
integrated database retrieval system
