Capsella rubella (pink shepherd's-purse): 17897765
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Entry
17897765 CDS
T02984
Name
(RefSeq) starch synthase 3, chloroplastic/amyloplastic
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00500
Starch and sucrose metabolism
crb01100
Metabolic pathways
crb01110
Biosynthesis of secondary metabolites
Module
crb_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
17897765
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
crb01003
]
17897765
Enzymes [BR:
crb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
17897765
Glycosyltransferases [BR:
crb01003
]
Polysaccharide
Storage polysaccharide
17897765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
CBM53
Glyco_transf_4
Glyco_trans_1_4
Glycos_transf_1
Glyco_trans_4_4
POG1_N
Motif
Other DBs
NCBI-GeneID:
17897765
NCBI-ProteinID:
XP_006304473
UniProt:
R0GNK2
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MEVCWQIQRPARLGKVLQEKGRLKISTCSIGFLPRSISSLASLESQYNSNGFLHQITASA
DFSRKKQGRMAASGPKSSGPRGFGRRTTVGSAQKRTQKKNGEKDSNATSTVTNEVSGVSK
LPETKADVQKQGSVVFGERNVSDSSDAKDGSDRLDKKTTEDDDLLKQKLKIERENLRRKE
IEALAKENLARGNRMFVYPVIVKPDEDIEVFLNRNLSTLKNEPDVLIMGAFNSWKWKSFT
RRLEKTWILGDWWSCLLHIPKEAYKIDFVFFNGQSVYDNNDSKDFCVEIKGGMDKVDFEN
FLLEEKLREQEKLAKEEAEREKQKEEKRRIEARKAAIEADRAQAKVETQKRRELLQPAIK
KAVVSAENVWYIEPSNFKAEDNVKLYYNKSSGPLANSKELWVHGGFNNWVDGLSIVEKLV
DAELKADPKRGDWWFAEVVVPGGALVIDWVFADGPPKEAFLYDNNSHQDFHALVPQRIPE
EIYWLEEESLMFRKLQEERQLKEEAMREKMEKTARLKAETKERTLKKFLLSQKDVVYTEP
LEIQAGNAVTVFYNPSYTVLNGKPEIWFRGSFNRWTHRLGPLPPQKMEAADDESSHVKTT
AKVPLDAYMMDFVFSEKEDGGIFDNKNGLDYHLPVMGGISKEPPLHIVHIAVEMAPIAKV
GGLGDVVTSLSRAVQELNHNVDIIFPKYDCLKHNFVKDLQFNRSYHWGGTEIKVWHGKVE
GLSVYFLDPQNGLFQRGCVYGCKDDAERFGFFCHAALEFLLQGGFHPDILHCHDWSSAPV
SWLFKDHYTHYGLIKTRVVFTIHNLEFGANAIGKAMTSADKATTVSPTYAKEVAGNSVIS
PHLYKFHGIINGIDPEIWDPYNDSFLPVPYTSENVVEGKKAAKEELQNRLGLKNADLPVV
GIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHGDRAR
LVLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLIAMRYGAVPVVRKTGGLFDTVFDVDH
DKERAQAQVLEPNGFSFDGADAPGVDYALNRAISAWYDGREWFNSLCKTVMEQDWSWNRP
ALEYLELYHSARK
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgtgttggcagattcagagaccggctaggctcggaaaggttttgcaggaaaag
ggtcggctcaagatcagtacttgttctattgggtttcttcctcgctccatttctagtctt
gcttcattggaaagtcaatacaattcaaatgggtttctgcatcagatcacggcaagtgca
gatttttcaaggaagaagcaaggcagaatggctgcttcaggaccaaaaagctcaggtccc
aggggttttgggcggcgaacaacagtaggaagtgctcagaaaagaactcagaagaaaaat
ggtgaaaaagatagtaatgccacttccacagtaacaaatgaggtttcaggggttagtaag
ctgcctgaaactaaagcagatgtacagaaacaaggctctgttgtttttggtgagaggaat
gtgtcagatagctcggatgctaaagatggaagtgaccgtttggataagaaaacaaccgag
gatgatgatttgttaaaacaaaagttgaaaattgaaagagagaatcttcgtaggaaggaa
atagaagcgcttgcaaaggaaaacttggcgaggggtaataggatgtttgtgtatcctgtg
attgtgaaacctgatgaagacatagaagtgtttctcaacaggaatctatcgactctgaag
aacgaacccgatgttttgatcatgggggcgttcaacagttggaaatggaagtcttttacg
aggagattggaaaagacatggattcttggagattggtggtcatgtctccttcatatcccc
aaagaagcgtacaaaatagattttgtgtttttcaatggtcaaagtgtatatgacaacaat
gactcaaaagatttctgtgtagagataaaaggtgggatggataaagtggactttgagaat
tttcttttggaagagaaattgcgagagcaagagaagttagccaaggaagaagccgaaagg
gaaaagcaaaaagaagagaagagaagaattgaagctcgaaaggctgcaattgaagctgat
agagcacaagcaaaggtggagactcagaaaagacgtgagctgcttcaaccggctattaag
aaagctgtagtctcggctgagaatgtttggtacattgagccaagtaatttcaaggctgaa
gataacgtaaaattatattacaataaaagctcaggtcctctggctaattccaaggaactc
tgggtacatggagggtttaataattgggttgatggattatctattgttgaaaagcttgtg
gatgcagagttaaaggctgatccaaagaggggagattggtggttcgctgaagttgtagtg
cccggtggtgctctagtgattgactgggtctttgctgatggaccccctaaagaagcgttt
ctgtatgacaataatagtcaccaagattttcatgcacttgttcctcaaagaattcctgaa
gagatttactggttagaggaagaaagtttgatgtttaggaaacttcaggaggaaaggcag
ttaaaagaggaagctatgcgtgagaagatggaaaagacagctcgcttgaaagccgaaaca
aaggaaagaacacttaaaaagtttctactatcccagaaagacgtggtttatactgagcct
ctagagattcaagcgggaaacgctgtgactgttttctacaatccttcatacacggttttg
aacggaaagcctgaaatttggtttagaggctcttttaatcgttggactcatcgcttgggt
cctttgccacctcagaaaatggaagcagcagatgatgaaagctcacatgtgaagactacg
gctaaggtgccattggatgcttacatgatggactttgtgttctctgagaaagaggatggc
ggaatatttgataacaaaaatggtctggattaccatttaccagtcatgggaggcatatca
aaggaaccaccattgcacattgttcatattgctgttgaaatggcacccattgcaaaggtt
ggaggcctaggtgatgttgtcactagtttatctcgcgctgttcaagaattaaaccataat
gtggatatcatttttccaaagtatgattgcttaaagcacaactttgtgaaggacttgcaa
ttcaacagaagttatcactggggaggaaccgaaataaaagtttggcatggaaaagtagaa
ggcctttcggtttactttttagacccacaaaatggattgtttcagcgagggtgtgtttac
ggttgtaaagatgatgcagaaagatttggtttcttttgtcacgcagctcttgaatttctt
ctccaaggaggttttcatccagacattcttcactgccatgactggtccagtgctcctgtt
tcatggttattcaaggatcattacacgcattacggtttaattaaaacccgtgttgtcttc
acaattcataatttggaatttggagcaaatgccattggtaaagcaatgacatccgcagac
aaagctacaacggtttcaccaacgtatgccaaggaagttgctggaaactctgtaatctct
ccacatttatacaagtttcacggaataataaacgggatcgacccagaaatatgggatcca
tacaatgatagcttccttcctgtaccttatacttcagagaatgtagtagaaggcaaaaaa
gcagccaaggaagaattgcaaaacaggcttggactaaagaatgccgatcttccggtagta
ggaattattacacgcttaactcaccagaaaggaatacatttgatcaagcacgctatttgg
cgtaccttggaacggaatggacaggttgtgttgttaggttcagctccagatcctcggatc
caaaatgatttcgtaaatttggcaaaccaattgcattcttctcatggtgaccgggctagg
cttgttctcacctatgatgagcctctttcccatttgatttatgccggggctgactttatt
cttgtaccgtcgatatttgagccgtgtggcctgacacagctcatagctatgagatacggt
gctgttcctgtcgttagaaaaactggaggacttttcgacacagtttttgatgtcgaccac
gataaagaaagggcacaagctcaagttctagaacctaatggcttcagctttgacggggct
gatgctcctggtgttgattatgctcttaatagggcgatatcggcatggtacgatggtaga
gagtggttcaactcgctgtgcaagacagtgatggaacaagactggtcatggaaccgtcct
gcacttgagtatcttgagctctatcactccgcacgtaagtga
DBGET
integrated database retrieval system
