Capsella rubella (pink shepherd's-purse): 17897768
Help
Entry
17897768 CDS
T02984
Name
(RefSeq) probable pectinesterase/pectinesterase inhibitor 19
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00040
Pentose and glucuronate interconversions
crb01100
Metabolic pathways
Module
crb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
17897768
Enzymes [BR:
crb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
17897768
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectinesterase
PMEI
DUF1280
DUF4913
Motif
Other DBs
NCBI-GeneID:
17897768
NCBI-ProteinID:
XP_006307348
UniProt:
R0GWP7
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MDALNKNSTVLIIIFLITISQTYFSLLNTDHIATDDDSVNDFITSLIKSCKRENKQTCKT
HLSELESLSSSLSATRRRALLLIFLKESVSKINTAMTSVRQEETSTAKENLVLVYEMWTS
AKDGIIDSMEELRRAGEKLSPKSYANIHTWLSSVLTSHLTSLDETYEGPFKRNVGSVLED
HIARARVALAIFTSISPRHSEIKSTSVVPDHPSWLSDGDKKNLNLSPQVLKHTADVVVAK
DGSGNYRSINEAIAAAPRLSAKRFVVYVKKGIYVEIVNIATHNITLIGDGPTSTILTGSL
NRNDGTKTFNTATLASNGDGFWAIDMCFRNTAGPTKGPAVALRVSGDISIIYRCRIEGYQ
DALYPHRKRQFYRECYITGTVDFICGFASAVFQYCTIVARKPMNKQANMITAQARPNLKK
VSGFTFQKCNITASADLANVKTTVKTYLGRPWSEYATVAFIESYIDDLVDPAGWAEWNGK
IGVKTFYREYDNHGSGADTSRRVKWTGFKATTDPKEVTYFTVTKLLQGELWLNATGVPYE
GGF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcttaacaaaaactctactgttctcatcatcattttcttaataaccatctcc
caaacctatttttcccttcttaacaccgatcatatcgcaacggacgatgatagcgtgaat
gacttcatcacctccctcatcaaaagttgcaaaagagaaaacaaacaaacatgtaaaacc
cacttatcggagctcgagtccttgtcctcatctctctccgcgacaagacgtcgtgcttta
ttgctcatattcttgaaggaatccgtgtcgaagatcaacacggctatgactagcgtgagg
caagaagaaacatcgacggcaaaggaaaacttggttttagtttatgagatgtggacatca
gcaaaagatggaatcatcgactcaatggaggaacttcgtagagctggagaaaagcttagt
cctaagtcttacgctaacattcacacatggcttagcagcgtgcttacgagtcatctaacg
agtttggatgaaacttatgaaggtccatttaaacgtaatgttgggtcggtgcttgaagac
cacattgctagagcacgagtggcgttggctatttttacctcaatttccccgagacactcc
gaaattaagtcgacgtcggtggttcctgatcatccgtcgtggttatccgatggggacaaa
aaaaatcttaatctctctcctcaggttttgaaacacactgctgatgtggtggttgctaaa
gacggcagcggaaattaccgcagcattaatgaggcaattgcggcggcaccaagacttagc
gccaaacgatttgtcgtgtatgtgaagaaaggcatttacgtcgaaattgtcaatattgcc
acacacaatattactctaattggcgatggtccaacatcaactatcctcacgggtagttta
aaccgtaatgatggtacaaaaacgtttaatactgcaactcttgcttctaatggtgatggt
ttttgggcgattgatatgtgttttcgaaacacagccgggcctacaaagggaccagcggta
gccctccgtgtcagtggagatatatctatcatataccgatgtaggatagaaggatatcag
gatgcgttataccctcacagaaagcgtcagttttacagagagtgctacatcaccgggacg
gtcgacttcatatgtggattcgcgtctgccgtcttccaatattgcaccattgttgcaagg
aaaccaatgaacaagcaggccaacatgatcacggctcaagcacgcccgaatttgaagaaa
gtatcaggattcacgttccaaaaatgcaatatcactgccagtgcggatttagccaacgtc
aaaaccacagtgaaaacctatctcggccgtccgtggagtgagtatgcaacagttgcattc
atagaatcgtatattgatgatctagtggatcctgcgggttgggcagagtggaatggcaag
attggtgtcaaaactttctaccgtgaatacgacaaccatgggtcgggagctgatacgagt
aggagggtgaaatggacagggttcaaagctactacagacccaaaagaagtgacgtacttc
actgttaccaaacttctacagggagaactatggctcaatgcgactggggtcccgtacgaa
ggaggtttttga
DBGET
integrated database retrieval system
