KEGG   Capsella rubella (pink shepherd's-purse): 17897901
Entry
17897901          CDS       T02984                                 
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein SEC31 homolog A
  KO
K14005  protein transport protein SEC31
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    17897901
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:crb04131]
    17897901
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:crb02044]
    17897901
Membrane trafficking [BR:crb04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    17897901
Secretion system [BR:crb02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   17897901
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40 WDR55 TPR_Sec16 Beta-prop_EIPR1 EIF3I TPR_GEMI5 ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_SCAP Prp18
Other DBs
NCBI-GeneID: 17897901
NCBI-ProteinID: XP_023632577
LinkDB
Position
Unknown
AA seq 976 aa
MDCIKKVDRSAFVAFSPEAPFMAAGTMAGAVDLSFSSSANLEIFELDFKSNDRDMLLVGH
CSSSERFNRLAWGSYGLIAGGLVDGNIGLWNPNRCESGEIEHVRHLSKHNGPVRGLEFNV
KSPNQLASGADDGTVCVWDLTNPSKPSHFLKGAGSSVQDEISSISWNKEFQHVLASTSYN
GTTVIWDVNNEKVITGFRNSASFDIFKGPPRCSVLQWDPDNCNQIMVASDEDKSPNVKLL
DIRYLQSPVRTFAGHDRGVIAMEWCPSDSTYLLTCAKDNRTICWNTKTGKIVAELPNGKN
WNFDVHWYPKIPGVISASSVDGKIGIYNLERCSSYVTEVDNIDSASLIAPKWYKRPVGAS
FGFGGKLVSFNNNQPEASEFIDSSVMSPVILHSVKTEQSLVNQISXFEAAIGNGEKSSLR
GFCEKKTEETKSEEEKETWGLLKIMLDEDGTAKSKLRTHLGFSLKSGENDQLVNEPHATS
SSEIVEETQQVSEGEEEEEEEEISDHPTFDDDAIQRSLIVGDYKEAVALCLSANKMADAL
VIAHIGGTRLWESTRDRYLKMSNASYMKIVSAMMNNDLMTLVQTRPLKSWKETLALICTF
AEGDEWTSLCDALASNLMATGFTLAATWCYICAGNVDKTVDIWSRSLENQSAGKSYAECV
QDLMEKTLVLTLATGNKRFSAPLHRLFESYAEILASQGLLATAIKFLKFLDSGDFSSDLS
ILRNQIALYAEPETTKPSVLEYTLPEISKPYQKKSSPPAPISNQPSITTFVPLNPPRELE
NPDQYQQHIIDYNYFTRSTNTTYNDPHVPDSHRSISSQDGPYLNTQIPQTVTPPMRPTIP
TQQVEAQPSRVAPPPTVETANTSNVPAHQKPIVATLTRLVREISERLGGTSRASPAKKRE
IENNSRKLGTLFVKLNKGEISKNAAEKLAHLCQALDKHDFGAALQIQVLMTNTEWDECNF
WLPNLKQLIKGRQNMR
NT seq 2931 nt   +upstreamnt  +downstreamnt
atggattgcataaagaaggttgatagatctgctttcgttgccttttctccggaagctccg
ttcatggcagccggaaccatggccggagccgtggatttgtcgtttagttcatccgccaac
ctagaaatcttcgaactcgattttaagtccaacgatcgtgatatgttacttgtaggtcac
tgctcaagctccgagcggtttaatcgactcgcttggggaagttatggtctcatagccggt
ggccttgtcgacggaaacatcggtttatggaatccaaaccgttgtgagtctggtgagatt
gagcatgttagacatctttcaaaacacaatggacctgttcgtggtcttgagtttaatgtt
aagtccccaaatcaacttgcttcgggggctgatgatggtacagtttgcgtttgggattta
acaaatccttcaaagccttctcattttcttaagggtgctggttcttctgtgcaagatgaa
atatcttcgatatcgtggaataaagagtttcaacatgttttagcatctacttcatataac
gggacaactgtgatatgggatgtgaacaacgagaaggttataacaggtttcagaaactct
gcatcattcgacatatttaaaggtccacctcgatgctcagttttgcaatgggatcctgat
aattgtaatcagatcatggttgcatcagatgaagacaaatcaccaaatgtgaaacttttg
gacataaggtatctacaatcacctgttcgcacattcgctggccatgacagaggtgtgatt
gcaatggagtggtgtccaagtgacagtacgtatctacttacttgtgctaaagacaaccga
actatttgctggaacacaaagacaggaaagattgtggctgagctacctaatggtaaaaat
tggaattttgacgttcattggtatccaaagatacctggagttatttcagcatcttcagtt
gatggaaaaattggcatatataaccttgagcgttgcagcagctatgttactgaagtggat
aatatagattctgcttctttaatagcaccaaaatggtacaaacgcccggttggagcatct
tttggatttggagggaagttagtttcatttaacaacaatcagcctgaagcatctgagttc
attgactcttctgtcatgagtccggttattctccatagtgtcaaaacagaacaaagtttg
gtgaatcaaatttcttgatttgaagctgcaataggaaatggagagaagagttcacttagg
ggtttctgtgagaagaaaacagaagagacaaaatccgaggaagagaaggaaacatggggc
ttgctgaaaatcatgcttgatgaggatggaaccgcaaaatcaaagttgcgtacccatctt
ggctttagtttaaagtctggggaaaatgatcaacttgttaatgagcctcatgctacctct
tcttctgaaatcgtggaagaaactcaacaagtgtcagaaggagaagaagaagaagaagaa
gaagaaatctctgatcatccaacatttgatgatgatgccatccaacgttcattaattgtg
ggagattacaaagaagcagtggctttgtgtttatctgcaaataaaatggctgacgcttta
gttattgctcatattggtggtacaagattgtgggagagtacccgtgatagatatctgaag
atgagcaatgcatcttatatgaagattgtgtcagcaatgatgaacaatgatctaatgacc
cttgttcagacaagaccacttaaatcttggaaagaaactcttgctcttatctgcactttt
gcagaaggagatgaatggacaagcctctgtgatgccctagcctcaaatttgatggctact
ggttttactttggctgcaacttggtgttacatttgtgcaggcaatgttgataaaacggta
gacatttggtcaaggagccttgaaaaccaaagtgctggaaaatcttatgctgagtgtgtt
caagatctaatggagaagacgcttgtcctcactttggcaactggaaacaagagattcagc
gcacctctacacagactctttgagagttatgctgagattttggctagtcaaggacttctt
gcaaccgcgataaagttcttgaaatttcttgactctggtgatttctcatccgacctttca
atcttgcggaaccagattgctctgtatgcagaacctgaaactactaaaccttctgtatta
gaatacactctgcctgaaatctccaagccatatcaaaagaaatcttctcctccagcacca
ataagcaatcagccatccataactacttttgttcctttgaatcctcctcgagaactagag
aaccctgaccaatatcagcagcatatcatagattataattattttacgcgatctacgaac
acaacatataatgatccacatgttccagactcacatcgatccatctcttcacaagatggt
ccatatcttaacactcagattccacaaactgttactccaccaatgagacctacaattcca
acacagcaagtagaagctcaaccatcacgtgtagctccaccaccaactgttgagaccgca
aatacttccaatgttccagcccaccagaagcctattgtggctacgttaacaaggctagtt
agagagatatctgaacgattaggaggtacttcacgagctagtcctgccaagaagcgtgag
atagaaaataactcaagaaaattaggaactctgtttgtgaaactaaataaaggggagatt
tcaaagaacgctgctgaaaaactcgctcatctttgtcaagctttagacaaacatgatttt
ggtgcagctttacaaatacaggtgcttatgacaaacaccgaatgggatgagtgcaacttc
tggcttccaaatctaaagcaactgatcaagggaaggcaaaatatgcggtga

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