Capsella rubella (pink shepherd's-purse): 17897937
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Entry
17897937 CDS
T02984
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A
KO
K14026
SEL1 protein
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
17897937
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Motif
Pfam:
Sel1
TPR_11
TPR_27
Motif
Other DBs
NCBI-GeneID:
17897937
NCBI-ProteinID:
XP_006306937
UniProt:
R0IMH6
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All DBs
Position
Unknown
AA seq
677 aa
AA seq
DB search
MRISGLGIVILSVLIFYCVELSVHARPVVLVLSNDDLNSGGEDNGVGESSDFDEFGESEP
KSEEELDPGSWRPIFEPDDSTVQAASPQYYSGLKKILSAASEGNYRLMEEAVDEIEAASS
AGDPHAQSIMGFVYGIGMMREKSKSKSFLHHNFAVAGGNMQSKMALAFTYLRQDMHDKAV
QLYAELAETAVNSFLISKDSPVVEPTRIHSGTEENKGALRKSRGEEDEDFQILEYQAHKG
NANAMYKIGLFYYFGLRGLRRDHTKALHWFSKAVEKGEPRSMELLGEIYARGAGVERNYT
KALEWLTLAAKEGLYSAFNGIGYLYVKGYGVDKKNFTKAREYFEKAVDNEDPSGHYNLGV
LYLKGIGVKRDVRQATKYFFVAANAGQPKAFYQLAKMFHTGIGLKKNLEMATSFYKLVAE
RGPWSSLSRWALEAYLKGDVGKALILYSRMAEMGYEIAQSNAAWILDKYGERSMCMGVSG
FCTDKERHERAHSLWWRASEQGNEHAALLIGDAYYYGRGTERDFVRAAEAYMHAKSQSNA
QAMFNLGYMHEHGQGLPLDLHLAKRYYDQALQSDATARLPVTLALASLWLRRNYADTVLV
RVVDSLPEVYPKVENWIENVVFEEGNATILTLVVCLITILYLRDRQRRQVVVADQVAADV
AQPLDADVAQQLAAFPQ
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgagaatctcaggtctcggaattgtaattctttctgtactcattttctattgcgtggaa
cttagcgttcacgctcgtcccgttgttctcgtcctctccaatgacgatctcaatagcggc
ggcgaagataacggagtcggagagtcctctgacttcgacgagtttggggaatccgaaccg
aagtccgaagaggagcttgatcccggttcctggcgaccgatcttcgagccagatgactcc
acggtccaagccgcgtcgccgcagtactactccggccttaaaaagattctatcggcggcg
agtgagggaaactataggttgatggaggaagcagtggatgaaatagaggctgcttcttca
gctggagatccacacgcgcagtcgataatgggcttcgtttacgggatagggatgatgaga
gagaagagcaaaagcaagtcgtttcttcaccataattttgcagttgcgggtgggaatatg
cagtctaagatggcacttgctttcacgtatctgcgtcaagatatgcatgataaagccgtc
caattatatgccgaattagcagagaccgctgtcaatagttttctgatctcaaaggactct
ccggtggttgaaccaactagaattcatagcggaactgaagaaaacaaaggggctttaagg
aaatcccgtggcgaggaggatgaagatttccagatattggaataccaggcacacaaaggg
aatgctaatgccatgtacaaaattggactgttctactactttggcctgcgtgggttaaga
cgtgatcacaccaaggcattgcattggttttcaaaagcagtagaaaaaggagagccgagg
tcaatggaacttcttggggagatatatgctcgaggagctggtgttgaaagaaactatacc
aaggcacttgaatggcttacacttgctgcaaaggaaggtctctattcagcatttaatgga
attggctacttgtatgtcaaaggttatggggtagataagaaaaacttcactaaggcaaga
gaatattttgagaaggctgttgacaatgaagaccccagtgggcattataacctaggagtt
ttgtatcttaaaggcatcggagtcaaaagggatgtgaggcaggcaacaaaatacttcttt
gttgctgcaaatgctggtcaaccaaaggctttctatcaactcgccaagatgttccatacc
ggaattgggcttaagaagaatctggaaatggcgacttcattttataagttagtagctgaa
aggggaccgtggagttctctctctagatgggcacttgaagcttatttaaaaggtgatgtg
ggtaaggctttgatcttgtactcaagaatggcggagatgggttatgaaatagcacaaagt
aacgctgcctggatcctcgataaatacggtgaaagaagcatgtgcatgggagtgtctggg
ttttgcacagacaaggagagacatgagcgggctcattcgttgtggtggcgtgcctctgaa
caaggcaatgaacatgctgctctgcttattggagatgcatattactatggccggggaact
gagagagattttgtacgtgcggctgaagcatacatgcatgctaaatcacagtcaaacgca
caagcaatgttcaacctcggttacatgcatgaacatggacaaggacttcccttggatctc
catttagcaaagcgttactatgatcaagccctccagagcgatgcaaccgcgagattgcca
gttacactagctctcgctagtttatggctccgtagaaactatgctgatacagtcctggtg
agagtcgtggattcattaccagaagtgtatccaaaggtagagaattggatagagaatgtg
gtgtttgaagaaggtaatgcaacaatactgacactcgttgtctgtctcattacaattctc
tatctccgggatagacaacgtagacaagtcgttgtcgccgatcaagtggcagctgacgtg
gcacaacccctcgatgctgatgtggcccaacaactcgctgcgttcccacagtaa
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