Capsella rubella (pink shepherd's-purse): 17898017
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Entry
17898017 CDS
T02984
Name
(RefSeq) homeobox-leucine zipper protein HDG2 isoform X1
KO
K09338
homeobox-leucine zipper protein
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crb03000
]
17898017
Transcription factors [BR:
crb03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
17898017
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
TUSC1
DciA_cyano_C
Motif
Other DBs
NCBI-GeneID:
17898017
NCBI-ProteinID:
XP_023632762
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MFEPNMLLAAMNNADSNNHNYNHHEDNNNEGFLRDDEFDSANTKSGSENQEGGSGNDQDP
LHPNKKKRYHRHTQLQIQEMEAFFKECPHPDDKQRKQLSRELGLEPLQVKFWFQNKRTQM
KNHHERHENSHLRAENEKLRSDNLRYREALANASCPNCGGPTAIGEMSFDEHQLRLENAR
LREEIDRISAIAAKYVGKPVSNYPLMSPPPLPPRPLELAMGNIGGEAYGNNPTDLLKSIT
TPTEADKPVIIDLAVAAMEELMRMAQVDDPMWKSLVLDDEEYARTFPRGIGPRPAGFRSE
ASRETAVVIMNHVNIVEILMDVNQWSTIFAGMVSRAMTLAVLSTGVAGNFNGALQVMTAE
FQVPSPLVPTRETYFARYCKQQGDGSWAVVDISLDSLQPNPPARCRRRASGCLIQEMPNG
YSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCERLASVMATNVSSGEV
GVITNQEGRRSMLKLAERMVISFCAGVSASTAHTWTTLSGTGAEDVRVMTRKSVDDPGRP
PGIVLSAATSFWIPVPPKRVFDFLRDENSRNEWDILSNGGVVQEMAHIANGRDTGNCVSL
LRVNSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNIVLNGGDPDYVALLPSGFAIL
PDGNANGGGDGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASMSCETA
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagccaaatatgttgctcgcggctatgaacaacgcggatagcaataatcacaac
tacaaccaccatgaagacaataacaatgaagggtttcttagggacgatgaattcgacagt
gccaataccaaatccggaagtgagaatcaagaaggaggatcaggaaacgatcaagatcct
cttcatcctaacaagaagaaacgttatcatcgtcacacccaacttcagatccaggagatg
gaagcattcttcaaagagtgtcctcacccagatgacaagcaaaggaaacagctaagccgt
gaactggggttggaacctcttcaagtcaaattctggttccaaaacaaacgtacccaaatg
aagaatcatcacgagcggcatgagaactcgcatcttcgggcggagaacgaaaagcttaga
agcgacaaccttagatatcgagaggctctcgcaaatgcttcgtgtcctaattgtggtggt
ccgacggctatcggagaaatgtctttcgacgagcaccaactccgtcttgaaaatgctcga
ttaagggaagagatcgaccgtatatcagcgattgcagcgaaatacgtaggcaagccagtc
tcaaactatcctcttatgtctcctcctcctcttcctccacgtcctctagaactcgccatg
ggaaatatcggaggagaagcctatggaaacaatccaaccgatctcctcaagtccatcact
acaccaaccgaagctgataaaccggtcatcatcgacttagctgtggctgcaatggaagag
ctcatgcggatggctcaagtggacgatccaatgtggaagagtttggttctagacgatgaa
gagtatgctcggacgtttcctagagggataggacctagacctgctggatttagatccgaa
gcttcccgagaaaccgctgttgtgatcatgaatcatgttaacatcgttgagattctcatg
gatgtgaatcaatggtctacgattttcgcggggatggtttctagagcgatgactttagcg
gttttatctactggagttgcaggaaacttcaatggagctcttcaagtgatgactgcagag
tttcaagttccatctccattagtcccgactcgtgaaacttatttcgcacgttactgtaaa
caacaaggagatggttcgtgggcggttgtcgatatctccttggatagtctccaaccaaat
ccccctgctagatgcaggcggcgagcttcaggatgtttgattcaagaaatgccaaatgga
tattctaaggtgacttgggtggagcatgtggaagttgatgacagaggagtgcataactta
tacaaacacatggttagtactggtcatgcctttggagctaaacgctgggtagcgattctt
gaccgccaatgcgagcggttagctagcgtcatggctacaaacgtttcctctggagaagtt
ggcgtgataacaaaccaagaagggaggaggagtatgctgaaattggcggagcggatggtt
ataagcttttgtgcaggagtgagtgcttcaaccgctcacacatggactacgttgtccggt
acaggagctgaagatgttagagtgatgactagaaagagtgtggatgatccaggaaggcct
ccgggtattgttcttagtgcagccacttccttttggatccctgttcctccaaagagagta
ttcgatttcctcagagatgagaattcaagaaatgagtgggatattctgtctaatggagga
gttgtgcaagagatggcacatattgctaacgggagggataccggaaactgtgtttctctt
cttcgggtaaatagtgcaaactctagccagagcaatatgctgattctacaagagagctgc
actgatcctacagcttcctttgtgatctatgctccagtggatattgtagcaatgaatata
gtgcttaatggaggtgatccggactatgtggctctgcttccgtcgggttttgctattctc
cctgatggtaatgccaatggtggaggagatggagggtcgctcttgaccgtggcttttcag
attctggttgactcagttcctacagcgaagctatctcttggctctgttgcaactgttaac
aatctaatagcttgcactgttgagagaatcaaagcttccatgtcttgtgagacagcttga
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