Capsella rubella (pink shepherd's-purse): 17898110
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Entry
17898110 CDS
T02984
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
17898110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crb03021
]
17898110
Enzymes [BR:
crb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
17898110
Transcription machinery [BR:
crb03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
17898110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
CSPP1_C
Motif
Other DBs
NCBI-GeneID:
17898110
NCBI-ProteinID:
XP_023633093
LinkDB
All DBs
Position
Unknown
AA seq
1186 aa
AA seq
DB search
MVVNAKDSTVPNIEDFKELHNLVTHHIESFDYMTDKGLEVMFNRIKPVTVYDSDSDNNLS
IWLENPVVFAPQKESFSSTSRKEPLFPFECRQAKISYTGTFMADVCFKYNEGVVVRDKFD
FGQFPIMLMSKLCSLRGADCRKLLKCKESTSEMGGYFVLNGIERVFRCVIAPKRNHPTSM
IRNSFRDRREGYSDKAVAIRCVRDDQSSVTVKLYYLRNGSARVGFWIGGREYLLPVGLVL
KALTKTNDEEVYKSLNCCYNENYGRGDGAIGTQLVRERAKVILDEVRDMGLFTREQCRKH
LGEHFQPVLDGLEKESYPTVAEAVLRDYIFVHLDNDHDKFNLLIFLIQKLYSLVDQTSLP
DNPDSLQNQEILVPGHLITVYLKEKLEEWLRKCKSLLKDELHNTSSKSKFSFESLADVKK
LFNKNPPRSVGMSIETLLKTGRMNTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGA
SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRTSRITSQFDSKGNIRDFLKI
RKSVVEVLIGAGMVSSLPKLVQAAPPEVIHVLLDGQVVGTLSSNLVTNVVSYLRRLKIEA
PSVIPEDLEVGYVPTSMGGSYPGLYLASCPARFIRPVKNISIPSESIELIGPFEQVFMEI
SCPDGGNGGRNNSCPATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYST
QALQFRADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMILN
KSSVERGMCHGQIYQTENIDLSDQNSRYDSGHKSFRRSTTDKSDHSTIDADGLPYVGQKI
YPDEPYYSIYDEVTNRIRTIKRKGTDPVIVDFVSVDMKSKKHPQKANIRFRHARNPIIGD
KFSSRHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSL
HGKFVDATPFRNAVINANGEKKRKSSLLVDDLGSMLKEKGFNYYGTEKLYSGILGVELEC
EIFMGPVYYQRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLLAHGA
SYLLHDRLHTSSDHHIADVCSLCGSLLTSSIANVQQKKLIQVTGKLPPGRTPKKVTCYSC
KTSKGMETVAMPYVFRYLAAELASMNIKMTLKLSDREGDEDLTPEQ
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgaacgcgaaagactcgacggttcctaatattgaagacttcaaggagcttcac
aatctcgtcacgcatcatatagagtctttcgattacatgacagacaaaggtctcgaagtt
atgttcaatcgaatcaaacccgttactgtctacgattcagactccgacaacaacttgagc
atttggttagagaatcctgtagtatttgctcctcagaaggagagtttcagttcaacatca
aggaaagagcctttgtttccctttgagtgtaggcaggcgaagatttcatacacaggaacg
tttatggctgatgtttgctttaagtataatgagggagttgttgtgagagacaaatttgat
tttggccaatttccgattatgctgatgtcaaagctttgcagcttaaggggtgccgattgt
cggaaacttttaaagtgcaaagagtcaacttctgaaatgggagggtactttgttttgaat
gggatcgagagagtgttccgatgtgttattgcacctaagcgaaaccatccaacaagtatg
atccggaactccttccgtgatcgtcgggaaggatatagtgacaaggcagttgccattagg
tgtgttagggacgaccagtcatctgtcactgttaagctgtattatcttcgcaatggaagt
gccagagttggattttggataggtggaagggaatatttgcttcctgtcggtcttgttctc
aaggctctcactaaaaccaacgatgaggaagtatataaaagcctgaactgttgctacaat
gagaattatggaagaggcgatggagctattggaacccaacttgttcgtgagagagccaaa
gttattcttgatgaagtgcgagacatgggcctttttacccgggaacagtgccggaagcac
ctaggagagcattttcaacctgttcttgatgggctagaaaaagaaagctatcctactgtt
gctgaagctgtgctcagggattatatatttgttcatcttgacaatgatcacgacaagttc
aatttgcttatcttcttgatccagaagctctattctttggtggatcagacttccttacct
gacaatccggattctttgcaaaatcaggaaattttagtcccaggtcaccttataacggtt
tacctcaaggaaaaacttgaagaatggctccggaagtgcaaaagtcttcttaaggatgag
ttgcataacacgagctcaaaatcgaaattttcctttgaaagccttgctgatgtcaagaag
ctttttaacaaaaatcctccgaggagtgttggtatgtcaattgagacattgctgaagaca
ggaaggatgaatacacagtctggtttggatttacagcagagagctggttacactgttcag
gccgagagattgaactttctccgtttcctttcatttttccgggcggttcatcgtggtgct
tcttttgctggacttcgtacaacaactgtgagaaagctgcttcctgaatcctggggtttt
ctttgccctgttcacactcctgatggggaaccttgtggattactgaatcatatgactcgt
actagccgaatcacttctcagttcgattccaaaggaaacattagagatttcttgaaaata
aggaagtcagttgttgaggttcttattggggcgggtatggtatcgtcattgccaaagcta
gttcaagctgcaccaccagaagtcattcatgttcttttagatggtcaagttgtaggcacg
ctatcttctaacttagtcacgaacgttgtctcctatttgcggagactgaaaatagaggct
ccttcagtgattcctgaagaccttgaagtgggatatgtacctacaagcatgggtggatct
tatcctggattgtatttggcatcatgtcctgcaagattcattaggcctgttaaaaatata
tctataccttctgaaagtattgaactgattggaccattcgaacaggtttttatggaaata
agttgtcctgatggaggaaatggaggaaggaataactcttgtccagcaactcatgaggaa
attcatccaaccgggatgataagtgtggttgctaatcttacaccttggtcagatcataac
caaagtccacgtaacatgtatcagtgtcagatggcgaaacaaaccatggcatactctact
caagctctccaatttcgtgccgaccagaaaatttaccatttgcagactcctcaatctcct
gtggtgcgcacaaaaacatacaccacttacagtattgatgagaatcctacagggactaat
gcaattgttgctgtccttgctcatacaggatttgatatggaagatgctatgattttgaac
aaatcatctgtggagcggggaatgtgccatggtcaaatataccagacagaaaatattgat
ctgtcagatcagaatagccgatatgatagtggtcataaaagttttaggaggagtactact
gacaaatcagatcattctactattgatgctgatggattaccatatgttggacagaaaata
tatccagatgagccatattatagtatctatgatgaggtaactaacagaataaggaccatt
aagcgaaaaggtactgaccctgtcatagttgactttgtctctgttgacatgaaaagcaag
aaacatccccaaaaggcgaatattcgtttccggcatgccagaaaccccataattggagac
aagttcagcagtagacatgggcaaaagggtgtttgttcgcaattgtggcctgatattgat
atgccgtttaatggagttactggaatgcgtccagatctcatcattaacccgcatgctttc
ccatcaagaatgacaattgctatgcttttggaatctattgctgctaagggaggtagtttg
catggaaagtttgtagatgcaacgccgtttcgtaatgcagtaataaatgcaaatggagaa
aagaagcgcaagtccagtttgcttgtagatgatctcggttccatgttaaaggaaaaaggg
ttcaactactatgggaccgagaaattatatagtgggattttaggagtagaactggagtgt
gagatatttatgggacctgtttactaccaaagactgcgtcacatggtctcagacaaattc
caggttagatccactggacaagttgatcaactaactcaccagccaatcaagggaaggaaa
cgaggtggaggtattcggtttggtgaaatggaacgagactcactgcttgctcatggagct
tcctatttattacacgacaggcttcacacttcttcggatcaccatattgcagatgtttgt
tcgctatgtggtagcttgctcacttcgtctatcgcaaacgttcaacagaagaagctaatt
caagttactggaaagttacctcctggtagaactccaaagaaggtaacttgctattcttgt
aagacaagtaaaggcatggaaacagttgcgatgccatatgtgttcaggtacttagctgca
gagttggcttcaatgaatattaagatgactcttaaattaagcgacagagaaggagatgaa
gatttaacaccagagcaataa
DBGET
integrated database retrieval system
