Capsella rubella (pink shepherd's-purse): 17898186
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Entry
17898186 CDS
T02984
Name
(RefSeq) fanconi-associated nuclease 1 homolog isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
17898186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crb03400
]
17898186
Enzymes [BR:
crb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
17898186
DNA repair and recombination proteins [BR:
crb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
17898186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VRR_NUC
HIRAN
FAN1_HTH
FAN1_TPR
PADR1_N
Motif
Other DBs
NCBI-GeneID:
17898186
NCBI-ProteinID:
XP_006304702
UniProt:
R0IGW1
LinkDB
All DBs
Position
Unknown
AA seq
891 aa
AA seq
DB search
MLTGRESLLRLIGKRRRSLPNRHLLLSIPTPDSLNLEVNDDGNLISLAGDDGRSSENQTP
NDDPSKFSDDLSPSTRKKRRLTQTTLFQSSFWSVPKQSEDSLVISTKQQPILGSETSELN
LVQRSESSDLIFCKVEDGSSSPRSEEISKTVTLDEATGEAIHTFIVGRKFSDVQDLEIGS
NIYLLRHPENIKDPNAIKVLSADSEMLGYLPKDISQCLSPLINEYDLKFEGIITSVPQNS
AEAVPIKIVCHKMTSDGWKECELYTDFKPLWEKVLQAVEHQMQFPPKTTRYQLNFNVLLQ
EVLRSCSHLFTVDEKAFLESFPSLSEDSQRIFVRLYTRKGPWFRLSNISYHEVSDSLQAL
KDLTVRGFMSSVKDANELDFQKMKEIIELLNVTELREILSMNKVFSRGSRKRDLIDSLCS
CYNDGTRINIATMILERTGLCAKIPSTVDSLIWRVERLFFLNGEQDLSSFVLLDLGIIKY
PSYKCIESEPIFLNRTKLLAYEEAIEVAQLMDESLDSEDSRTVLKCIMISETRIFSSSLD
PAQLAAFNCFTAPWVYSKVVFLGVSFLENHKRYNQAAYLLRRLLSCFHCDRRRGYWTVRL
STDLEHMGRPNESLVVAEQGLLDPWVRAGSRVALQRRILRLAKPPRRWKTPSFSNLVENK
IPEVTIQGRSLNCEVGMKNRFYGEDGEQCGVEQLALQYYSGEGGGWQGIHTESSIWLTIF
GLLMWDILFSDVPGVFQTRFQTAPLDLETESFYLTRKEMIESQLEKVANGMAEEILIISY
ETHRGTACRGVAWERFSLEELRAAVACVGGMCVASLCRHLAQDYRSWCSGMPDLLIWRFK
ENGHEGEAKLVEVKSERDRLSEQQRAWLLLLMDSGFNVEICKVRPACLTKT
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccggacgggagagtttgctccggttgatcggaaaacgtcggcgatctctcccc
aatcgccaccttcttctctccattcctactccggattcgttaaatctcgaggtcaacgac
gatggcaatctcatctctttagccggagatgatggtcgttcgtcggagaatcagactccg
aacgatgacccgagcaaattctctgatgatttgagtccatccactagaaagaaacggaga
ttgactcaaaccactctttttcagtcaagtttctggtcagtgccaaaacaatctgaagat
agtcttgtaatctctaccaagcagcagccaatacttggttctgaaacttctgaattgaat
ttggtgcaaagaagtgagtctagtgacctcattttctgcaaggttgaagatggttcatct
tctccaagaagtgaggagatttcaaaaactgtgactttagatgaagccactggtgaggct
attcatacctttatagttggtaggaagttcagtgatgttcaggatttagaaattgggagt
aatatttatcttttgagacatcctgaaaatatcaaggatcccaacgctataaaggttctt
tctgcagattctgaaatgcttggatatctacctaaagatatctctcagtgcttgtccccg
ctgatcaatgagtatgaccttaagtttgagggaataataacatctgttcctcagaattct
gctgaagctgttcctatcaaaattgtttgtcacaaaatgacatctgatggttggaaggaa
tgtgaactttatacagattttaaacctctttgggagaaagttcttcaggctgttgagcat
cagatgcaatttccgcctaaaacaacaagataccagttgaacttcaacgtattactacaa
gaggttctaagaagctgctctcacctgttcacagttgatgaaaaggcattcttggaatct
ttcccctctctttcagaagatagccaaagaatttttgtccgtctttacacacgaaaagga
ccttggtttaggctatcaaatatttcataccatgaggtgtctgattctcttcaagccctg
aaggatctaacagtcaggggatttatgagttcagtgaaggacgcgaatgaactagatttc
caaaagatgaaggagatcatagagttgcttaacgtcactgaacttcgtgagatcttatct
atgaacaaggtgttcagtcgaggctcgagaaagagagaccttattgattcactttgctct
tgttataatgatggaacgaggataaatatagccacaatgattctagaaagaacaggactc
tgtgctaagatacccagtacagtggactctctcatatggcgtgttgagaggcttttcttc
ctcaatggagagcaagatttgtcctcttttgtattactggatcttggtattatcaaatac
ccaagttacaaatgcattgagtcagagccaatctttttgaatcggacaaagcttctagca
tatgaagaggccattgaagtggctcagctgatggatgaatctcttgacagtgaggattct
cggacagtgctgaaatgcatcatgatttctgaaacccgcatattcagttcgtctttggat
cctgcgcagcttgctgcctttaactgctttactgctccatgggtttactcaaaggtggtt
tttttaggagtctcctttcttgagaaccacaagaggtacaaccaagcagcctatctactg
aggcggttgctcagttgtttccattgtgacaggagacgaggatattggacagtcaggtta
tcaacagatttggagcacatgggacgcccaaatgagagccttgtagtagcagagcaagga
ctattggatccttgggtgcgtgctggttcaagagtagctttgcaaagacgcattcttcgt
ctggcaaaacctccaagacgctggaaaactcccagtttttcaaatctcgtcgaaaacaag
atccctgaggttaccattcaagggagatcattgaattgtgaagttggcatgaaaaatagg
ttttatggggaagacggagaacaatgtggagtggagcagctcgcattacagtattacagt
ggagaaggaggaggatggcaagggattcatacagagagtagtatttggttaacaattttc
gggcttctcatgtgggacattctattttccgatgtcccgggtgttttccaaacccgattc
cagaccgctccattggacttagagactgaatccttctatctaaccaggaaggaaatgata
gaatctcagctagagaaagttgcaaacggaatggctgaagaaatactaatcatatcatat
gaaacacaccgcggaacagcatgcagaggagtggcttgggagcggttttcattagaggaa
ctaagagcagcagtggcttgtgttggaggtatgtgtgtagcatctctgtgccggcactta
gctcaagactataggagctggtgcagtggaatgcctgatctgctaatatggcggttcaag
gagaatggtcatgaaggtgaagctaagcttgtggaagtgaaatcagagagagataggtta
tcggaacagcaacgagcttggctcctacttctaatggattcaggatttaatgttgagatt
tgcaaagtaagacctgcttgtttaactaaaacttaa
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