Capsella rubella (pink shepherd's-purse): 17898202
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Entry
17898202 CDS
T02984
Name
(RefSeq) nuclear pore complex protein NUP214
KO
K14317
nuclear pore complex protein Nup214
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
17898202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17898202
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
17898202
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PrgH
Motif
Other DBs
NCBI-GeneID:
17898202
NCBI-ProteinID:
XP_006306239
UniProt:
R0GT67
LinkDB
All DBs
Position
Unknown
AA seq
1821 aa
AA seq
DB search
MSKVEVEEDMEGDRIPTNDYYFERIGQPISIKEDDAQFDLDNPPSQPLAISERHGLVFVA
HSSGFFVGRTKDVISASKKSVGKGDKVYIQDLSLVDVPVGDVRILSLSADDSILAVSVAA
DIHFFSVDSLLKKDAKPSFSYSPDHESGFVKDFRWTRKQKHSYLVLSSSGKLFHGIDNAP
PKRVMDGVDAVEWSSKGSYIAVAQEKSLRIFSSKFNEKRCIALSFDACIGDSDEACLVKV
DTIRWVRNNCILLGCFQLIDGREENYFVQVIRSPDGKISDDSSNLVALSFSDLFPCSMDD
LVPVGVGPHLLFSYIDQCKLAITANRKSIDEHIVVLDWSPGDNKTAVSVVDIDRETFLPR
IGLQENGEDNMIMGLCIDTVSVEGTVNVRSGDDELKELPPYFVLVCLTLEGKLIMFNVAS
VARPPASSHVDLVSSSDTEDAYTPSVEDDLSKQSSEEPEQHQKSSFSVQNEQKRLISEEF
AIEERFPNDNIFSKEFESVKSSVSGDKNKKQETYDETPLKVEDGQQSMIPRQFGSSFGQP
PLPLGYDTNKFAGFGPVSRVPEKLQNEISAQSKSLHLLANVESKSKPALFGSPGLQNTFF
QSPQNSPSQPWSSGKGISPPNFLPSPFPSVKDTQHKQSVQSGTGIVNPPMSITEKPVQVI
ETGRASALSNFSPPLGQNRDANEEIEKIEPVPSIRASQLSQQVKSSFEKSASNQQHKTPL
STGPLRLDHNMSKQPSNINEMARDMDTLLQSIEGPGGFKDSCAFLLESEVEELEQGLENL
AGKCQTWKSTIHEQQAEIQHLLDKTIQVLAKTTYMEGMYEQTADNQYWQLWNRQKLNPEL
EAKRQHIMKLNKDLTHQLIELERYFNRLELDRYHEDGGLTVARRGVPTRSAPSRRVQSLH
SLHNTMCSQLAAAEQLSECLSKQMTLLKIDSPVKKNVKQELFETIGIPYDASFSSPDAVK
AKNSGKNLLLSSIPASINAKSRQRQSSAMKSSEPETARRRRESLDRNWAAFEPPKTTVKR
MLLQEQQKTGMNNHTVLSDRLRSANNLQKQSLLRLKDHASPVVSSNKGIMESFQQDTSEA
QSTPFKTRPPMPQSNSPFTISPISASKPSFNWSGNNSSSTTSYTEDAPLKSKDTRQVLQP
GASNFPLKLPVASTVFEQTENKAGEFKFSEAKANAFVETAAGSAQRLSTTSSGSDFESNK
GLDTQLLPTFTGAGASSFPSKSLFGFKTSGSIPGDKVTFPAETVSVSSLPLSSTSLDSVS
TFSTPSSPLVSSSTQDLVPAPIPISSKPAPQTFTVTSTSTVSATDFSVPFGKSLTSANVD
LNQAATSTLSPSPGPTTGFSFKLPALSTSSPEIVSSSIGQSSLFPPSSTASQVSSNLVSA
SNFLSDSNRLLSSTSSSSTPLSTSTAPNAFQSPQVSTPSSVASIIEPVSESKPEAQSSSI
LKTESTVDSVANATKTQIEPLPVKSETSNTETTVTPGSSSGFLSGFSSGTQSSFANMAPP
SFSWPGSSQPQQLSTTPAPFPASSPTSASLFVEKKDIVDTQEDEMDEEAPEASQTTELSM
GSFGGFGLGSTPNPAAPKANPFGGPFGNATTTSTPFNMTVPSGELFKPASFNFQNPQPSQ
PAGFGAFSVTPSQTPAQSGFGQPSQIGGGQQALGSVLGSFGQSRQIGAGLPGATFGSPSG
FGGSNPGSSLPNAPASGGFAAAGSSSTGGFAGMASAGRGFAGASSTPTGGFAALASGSGG
FAGAAPGGGGGGFGGLGSGSGGFGGFAPQSSGGFASAAGGGGFGGFGGQAQGQSGGGGFS
AFGGNSGATGNPSELFTQMRK
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagtcgaggttgaagaagacatggaaggagatcgcatcccaactaacgattac
tacttcgagagaatcggccaacctatcagtatcaaagaggatgatgctcaattcgatctc
gataaccctccgtcacagcctctcgctatctccgaacgccacggcctcgttttcgtggca
cactcctccgggtttttcgttgggaggactaaggatgtaatttctgcatcgaagaagagt
gtcgggaaaggtgataaggtttatatccaggatttgagcctcgtggatgtacctgttgga
gacgttcgtatcttgtctctctcagcggatgattcgattcttgctgtctccgtcgctgct
gatattcatttcttctctgtcgattcacttcttaagaaggatgcaaaaccttctttttct
tattcacctgatcatgagtcaggctttgttaaggattttcggtggacaaggaaacagaag
cattcatatcttgttctttctagttctgggaagctctttcatggaattgacaatgcaccc
cctaaacgtgttatggatggtgttgacgcggttgaatggagttcgaaagggagttatatt
gctgtagcccaagaaaaaagcctgcggattttttcatcaaaattcaatgagaaacggtgc
atagcactatcgtttgacgcctgtattggcgattctgatgaagcctgtttagtcaaagtt
gatactatcagatgggtacgcaacaactgtattcttcttggatgctttcagctgattgat
ggcagggaagaaaactactttgttcaggttatcaggagtccagatgggaagatttctgat
gattcgtccaatttggttgctttatccttctccgatttgtttccatgttctatggatgat
cttgttccggttggtgttggacctcatttgctctttagctacatagaccaatgcaaactg
gcgatcaccgcaaacagaaagagcatagatgagcatattgttgtacttgattggtcacct
ggtgataacaaaactgcagtctctgttgttgatattgatcgagagacctttttgccaagg
attgggctccaagagaatggcgaagacaatatgattatgggactctgtatcgatacggtt
tctgtggagggaactgttaatgtccgttctggagatgatgaacttaaagaactcccgcca
tattttgttcttgtgtgcctcactttggaaggaaaactgatcatgtttaatgttgctagt
gttgcaagacccccagcttcatctcatgttgatttggtctcttcttctgatacagaagat
gcatataccccttcggttgaagatgatctttctaaacaatcttctgaagagcctgaacaa
catcaaaagtcgagtttttcagtacaaaatgaacagaaacgcctcatctcagaggagttc
gctatcgaagaaaggttcccaaacgataacatatttagtaaggaatttgagtctgtaaaa
agttcagtgtctggggacaagaacaagaagcaagaaacatatgatgaaacaccgttaaag
gttgaagatggtcaacaaagcatgattcctaggcagttcggatcaagttttgggcaacca
cctttgcccttaggatatgacaccaataaatttgcaggattcggtcctgtcagccgtgtt
cctgaaaagcttcaaaatgaaatatctgcgcagtctaagtctctgcatttactggccaat
gttgagtcaaagagtaaaccagctttatttggatctcctggcctgcaaaacacttttttt
cagtcaccacaaaactcaccatctcagccatggtcaagtgggaaaggcatctcaccgcca
aattttttacccagtccctttccttctgtgaaagatactcagcataagcaatctgtacag
tctggaaccggtattgtgaatcctcctatgagcatcaccgagaaacctgtacaagtcatt
gagactggaagagcatcagctctgagcaattttagtcctccgctaggccaaaatcgggac
gctaatgaagaaatagagaaaattgagccagtaccttctatccgtgcctctcaattgtca
caacaggtgaaatcttcattcgaaaaatccgctagtaatcagcagcacaaaactccgctc
agtactggacctctgagactcgaccataacatgtcaaagcaacccagtaatataaatgag
atggccagagatatggatacgcttttgcagtccattgaaggaccggggggtttcaaagat
tcttgtgcttttttacttgagagcgaggttgaagaactggagcaaggacttgaaaatctt
gctggcaagtgccaaacgtggaagagcactattcacgagcagcaagcagagatccaacat
cttcttgacaaaacaattcaagttttggcaaaaacgacatacatggaaggtatgtatgag
caaactgctgataaccagtactggcaactttggaaccgtcagaagttgaatcctgagctt
gaggccaagcggcagcatattatgaaactaaataaggatttgacccatcaactgattgaa
ctagagagatattttaatcggcttgaacttgatcgctaccatgaggatggtgggctaact
gtggcacgaagaggcgtgccaactagatctgctccttccagacgtgtgcaatcccttcac
agccttcataatacaatgtgttcccaattggcagctgctgagcaactctctgagtgtctc
tcaaaacaaatgacacttttgaaaatcgattcacctgtaaaaaagaatgtgaagcaggaa
ttgtttgagacaattgggatcccttatgatgcttctttcagttcaccagatgcggtaaaa
gctaaaaattcaggaaaaaacttattactctcttctattcctgcaagtataaatgcaaag
tcaagacaacgccaatcatctgctatgaaaagttctgagcctgaaactgccaggaggaga
agagaatcactagacaggaattgggctgcttttgagcctccaaaaacaactgtcaaaagg
atgcttctgcaggagcaacagaaaactggtatgaacaaccacactgtcttgagtgacaga
ctacggtctgcgaataatttacaaaagcaatcactgcttcgcctgaaagatcatgcatca
cctgtagtctcctcgaataagggtattatggagtcattccaacaagacacatctgaagct
caatcaaccccatttaaaacgaggccacctatgccacaatccaacagtccctttaccatc
tctccaatctctgcatccaaaccaagttttaattggtctggaaataattctagcagtaca
acttcttatactgaggatgccccactgaagagtaaggatacaaggcaagttttacaacca
ggagcatcaaattttcctctgaaactaccagtagcctcgactgtatttgaacagacagaa
aacaaggctggagaattcaaattttctgaagctaaggccaatgcgtttgttgaaacagct
gctggaagtgcgcagcggctttctaccacatcatccggatctgattttgaatcaaacaaa
ggtcttgacactcagcttttaccgacgtttactggtgccggtgcatctagtttcccttca
aaatctttgtttggtttcaaaaccagtggcagtatccctggtgataaagttacttttcct
gctgaaacagtatcagtttcttctttacctttgtctagtacatcacttgattccgtttcc
accttttctacaccatcatcacctctagtgtcatcctctacacaagatttagttccagca
cctattcccatcagctcaaaaccagcaccacagacgtttacggtcacgtctacatctaca
gtttcagctacggatttcagtgttccatttggtaaatcgttgaccagtgccaatgtagat
ctcaatcaagcagctacatcaacactttctccatcacctggcccaacaactggtttctct
tttaaattaccagctttgtctacatcgtcccctgaaatcgtctcatcctcaataggccaa
tcttcattatttcctccatcttctacagcatcgcaagtgtcatctaatctggtatctgca
agcaactttctgtccgatagtaatcgtttgctttcatcaacttcctcatcttcgactccc
cttagtacctcaaccgctcctaatgcgtttcagtctcctcaagtttccaccccgtcttct
gtcgcatccattatagagccagtctcagaatctaagccagaggctcaaagttcttcaatt
ctaaaaacggaaagtactgttgattctgtagcaaatgcaacaaaaacacagatcgagccg
ctaccggtgaaaagtgagacttcaaacacagagactactgtaacccctggcagttcatct
gggtttttgtctggattttcatcaggaacacagtctagttttgcaaacatggcgcctcct
tcattcagttggccaggtagttctcagccacaacagctatcgactacacctgcccctttc
cctgcgtcctcaccaacttctgcaagtctatttgtcgagaaaaaagatattgtagataca
caggaagatgaaatggacgaagaagctccagaggctagccagacaactgaacttagtatg
ggaagttttggaggtttcggacttgggtcaactccaaacccggctgcccccaaagccaat
ccatttggtggtccctttggtaatgctacaacgacaagtactccattcaatatgacagtc
cctagtggcgagctattcaagcctgcatcgttcaatttccaaaatcctcaaccatctcaa
ccagcagggtttggtgcgttttctgtaacaccttctcagacacctgctcagagcggattt
ggccaaccgtcacagattggtgggggacagcaagctctggggtcggttcttggctccttt
gggcagtcgagacaaattggtgctggtctcccaggagctacgtttggttctccttctgga
tttggtggctctaacccaggaagcagtctgccaaatgcaccagcatccggtggttttgct
gctgctggttctagttccacaggaggctttgcgggaatggcttcagctggtagaggcttt
gctggtgcttcttctactcctactggtggctttgcggccttagcttcaggtagtggaggc
tttgctggtgcagctccaggaggaggaggcggtggatttggtggacttggttcaggctct
ggaggttttggaggttttgctcctcagagtagtggaggtttcgcaagtgcagcaggaggt
ggtggttttggtggttttggcggccaagcccaaggtcaaagcggtggtggtgggttctca
gcctttggtgggaactcaggggcaacaggaaatccatcggaactctttacacagatgaga
aaatga
DBGET
integrated database retrieval system
