Capsella rubella (pink shepherd's-purse): 17898391
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Entry
17898391 CDS
T02984
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crb03000
]
17898391
04121 Ubiquitin system [BR:
crb04121
]
17898391
Transcription factors [BR:
crb03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
17898391
Ubiquitin system [BR:
crb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
17898391
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
17898391
NCBI-ProteinID:
XP_006306627
UniProt:
R0ILT0
LinkDB
All DBs
Position
Unknown
AA seq
1106 aa
AA seq
DB search
MSSQVRRDRRERPRFTSRTTQQTWVPRGTSSTSVVVNETPFPLDANTNSGNLDDAGARPG
PVYQQRQHYESAPLLNDPRQRSNVPGPPSYSRQRRNNVSRPVLDNRQRGGDRGRLPRTGN
EGTGLDRERNKHNENTMMTDPNLPQLLQEIQDKLMKGSIECMICYDMVRRSANIWSCSSC
YSIFHLNCIKKWARAPTSVDLLADKNQGSNWRCPGCQFVQLTSSKEIQYRCFCGKRKDPP
SDPYLTPHSCGDICGKPLEKEFATAATVKENTCPHVCVLQCHPGPCPPCKAFAPPRNCPC
GKKMIRTRCSERKYDLTCGQSCDKLLNCGRHRCERACHVGPCDSCQVQVNASCFCKKTVE
SVICGEMNVKGEVTAEDGVFSCKLNCRKQLECGNHECRDVCHPGPCGDCEFLPSRIKACY
CGKTSLEEERQSCLDPIPSCSNICSKLLPCGLHNCNEMCHPGGCSPCLVQVRQKCRCGST
SRTVECYKTVSETEKFICAKPCGRKKNCGRHRCSERCCPLLNHPKNDDLSGDSDLHFCHI
PCGKRLRCGQHSCETLCHTGHCPPCLEMIFTDLACACGKTSIPPPLPCGTPVPSCQLPCS
VPQPCGHSATHGCHFGDCMPCSVPVEKKCIGGHVVLRNIPCGLKDIRCNKICGKTRCCGM
HACARTCHPEPCDNGGNASVTGLRVTCGQTCGAPRRDCRHTCAALCHPSAPCPDQRCEFP
LKITCSCGRITATVPCDAGGSAGGFSGDSIYETSILQKLPVPLQPVESNGNRIPLGQRKL
TCDEECAKLERKRVLQDAFDITPPNLDALHFGENTAMTEVILDLYRRDPKWVLAVEERCK
FLVLGKARGSTISSLKLHIFCTMEKDKRDAVRLIAERWKLAVSNAGWEPKRFVVVYVTQK
SKPPTRIIGVKGVISVGAPHAPAFDPLVDMDSRLVVCFFDLPREANISALVLRFGGECEL
VWLNDKNALAVFHDPARAATAMRRLEHGSVYQGAVVVVQNPGQSPSLSNAWGIPGSSVQK
GNPWNKAVVKELDDSWETEDSPIGGSMWKTAKDSDLITPNRWTILESDKAVSVEPLAQTE
GTSSSEAAGKQPEETSVVDDWEKVCD
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcaagtcaggagggatcggagagaaaggccaaggttcacttctcgaactacc
cagcaaacatgggttcctagaggaacctcctctacctccgtggttgtaaatgagactccc
tttcctcttgatgcaaatacaaattcgggaaaccttgatgatgctggtgctagacctggt
cctgtttatcagcaaaggcagcactatgagtctgctcctctgctcaatgacccgcgtcaa
aggagtaatgtcccaggtcctccttcttatagccgccaaaggagaaacaatgtttcgaga
cctgtactggataaccgtcagagaggtggggataggggtcgcttgccccggactgggaat
gagggaacagggttggatagagaaaggaataaacataacgagaatactatgatgacagac
ccaaatctgcctcaacttctgcaagagatacaggataagctaatgaagggttctattgag
tgtatgatttgttatgacatggttagaaggtctgctaatatctggtcttgctccagttgt
tactctatattccatctgaactgtattaagaaatgggctcgagcaccaacttcggttgat
ttgttggcggataaaaaccaaggtagtaattggagatgtccaggttgtcagtttgttcag
ttaacatcgtcaaaggagatacaatatcgatgcttttgtggaaagaggaaagacccacct
agtgatccgtatctgactcctcactcttgtggagatatctgtgggaagccgctggagaaa
gaatttgcgacagctgcaactgttaaagaaaatacatgtcctcatgtttgtgtattgcag
tgtcatcctggtccatgccctccatgcaaggcgtttgccccacctcgtaattgtccatgc
gggaagaagatgatcagaactagatgctccgaaagaaaatatgatcttacttgtgggcag
agttgcgataagcttcttaattgtggtcgtcatcgatgtgaaagggcatgtcatgtaggc
ccttgtgatagttgtcaggtacaagtcaatgcctcctgcttttgcaagaaaacggtggag
agtgtaatttgtggtgaaatgaatgtgaaaggagaggtgacagcagaagatggcgtcttt
tcatgcaaactaaactgcagaaaacagcttgagtgtggaaaccatgaatgtcgtgatgtt
tgccatcctgggccttgtggggactgtgagttcctgcctagtagaattaaggcatgctat
tgtgggaaaacgagtttggaagaggagaggcagagttgccttgatccaattccttcttgc
tcaaacatttgcagcaagcttcttccttgtgggttgcataactgcaatgagatgtgccat
ccaggtggttgttcgccttgtttagtccaagtgaggcaaaaatgtcggtgcggttcaaca
tcccgaactgtggaatgctacaaaacagtttcagagaccgagaagttcatttgcgccaaa
ccatgtggccgtaagaaaaactgtgggaggcatagatgtagtgagcggtgctgccctctc
ttgaaccacccaaagaatgatgatttgtcaggcgattctgatctccacttttgccatata
ccttgtggaaagaggctaaggtgtggacaacattcctgtgaaactctatgtcacactggt
cactgtcctccttgccttgagatgattttcactgatcttgcatgtgcttgcggaaaaact
tcgatacctcctccattaccatgtggaacacctgtcccgagttgtcagcttccttgctca
gttcctcagccttgtggccattccgcgacgcatggttgccattttggagactgcatgcct
tgttcagtacccgtggagaagaaatgcattggtggtcatgtggttctcaggaatataccg
tgtgggttaaaagacattaggtgtaacaaaatatgcggaaaaacaaggtgttgtggcatg
catgcttgtgccaggacgtgtcaccctgaaccttgtgacaatggtggtaacgcatctgta
actggtctgcgtgtaacttgtggtcagacgtgtggtgctcctagaagagactgcagacac
acatgtgcagcgctgtgtcatccttctgcgccttgccctgatcagagatgtgagtttcca
ctcaaaattacttgttcatgtggtcgcataacagctaccgtcccttgtgatgctggagga
agtgctggtggttttagtggtgactctatctatgaaacctccattttgcagaagcttcca
gtgccgctccaacctgtcgagtcaaatgggaataggatccctcttgggcagagaaagctt
acttgtgatgaggagtgtgctaagctggagcgtaagcgggttcttcaagatgcatttgat
atcactcctccaaatttagacgctttacattttggtgagaatactgccatgactgaggta
attttagatctttatagacgtgaccccaagtgggtgctagcagttgaggagcgatgcaag
tttttggtacttggaaaggccagaggtagcacaattagctccctaaagctccatatcttc
tgtactatggaaaaggataaaagagatgcagtacggttgatagctgaaaggtggaaactt
gctgtaagcaatgccgggtgggaaccaaaacgctttgtagtggtttacgttacacagaag
tcaaaaccccctacaaggatcattggagttaaaggtgttatctcagtaggcgcgccccat
gcaccagcctttgatccactggttgatatggattctcgactcgtggtttgtttttttgat
ctcccaagggaagctaacatcagtgccttggttctgagatttggaggtgaatgcgagctt
gtttggttgaatgacaagaatgcattagccgtcttccacgatccagctcgagcagccact
gccatgagaaggcttgaacacggttctgtgtaccaaggagcggttgttgttgtacagaac
ccaggacaatctccatctctcagtaacgcatggggaataccgggtagctcggttcagaaa
ggaaatccttggaataaggcggtggttaaggaattagatgactcttgggaaacagaggat
tctcccattggagggtctatgtggaaaacagcaaaggatagcgatttgatcactcccaac
cgttggaccatactcgagtcagataaggctgtctcagtggagccgctagctcagaccgaa
gggacaagtagttcggaagctgctggtaagcaacctgaagagacttcagtggttgatgac
tgggagaaagtatgcgactga
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integrated database retrieval system
