Capsella rubella (pink shepherd's-purse): 17898396
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Entry
17898396 CDS
T02984
Name
(RefSeq) beta-hexosaminidase 2
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00511
Other glycan degradation
crb00513
Various types of N-glycan biosynthesis
crb00520
Amino sugar and nucleotide sugar metabolism
crb00531
Glycosaminoglycan degradation
crb00600
Sphingolipid metabolism
crb00603
Glycosphingolipid biosynthesis - globo and isoglobo series
crb00604
Glycosphingolipid biosynthesis - ganglio series
crb01100
Metabolic pathways
crb04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
17898396
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
17898396
00513 Various types of N-glycan biosynthesis
17898396
00531 Glycosaminoglycan degradation
17898396
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
17898396
00604 Glycosphingolipid biosynthesis - ganglio series
17898396
00511 Other glycan degradation
17898396
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
17898396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
crb03110
]
17898396
Enzymes [BR:
crb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
17898396
Chaperones and folding catalysts [BR:
crb03110
]
Intramolecular chaperones
Others
17898396
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Motif
Other DBs
NCBI-GeneID:
17898396
NCBI-ProteinID:
XP_006306133
UniProt:
R0GTC5
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MMNLSKFHVILIQLLFVISLLSPFLSTSTPINIWPKPRYLSWPQHIAIVLSPKFTILAPE
HQYLSASVTRYHNLIRSENYSPLITHPVKFMKGYTLSNLKVIVTDLSLPLHHGVDESYNL
SIPIGSSSAHLLAPSVWGAMHGLETFSQMIWGTSPDLCLPVGIHIQDSPLFGHRGVLLDT
SRNYYGVDDIMRTIKAMSANKLNVFHWHITDSQSFPLVLPSEPSLAAKGSYGPDMVYTPE
DVSKIVQYGFEHGVRVLPEIDTPGHTGSWGEAYPEIVTCANMFWWPAGKSWDERLASEPG
TGQLNPLNPKTYDVVKNVIQDVVKQFPESFFHGGGDEVIPSCWKTDPAIKSFMSSGGTLS
QLLEKYINSTLPYIVSQNRTVVYWEDVLLDAQIKVDPWVLPKEHIILQTWNNGPENTKRI
VAAGYRVIVSSSEFYYLDCGHGGFLGNDSIYDQHGGGGGSWCAPFKTWQSIYNYDITYGL
LDEEEKKLVLGGEVALWSEQADSTVLDSRLWPRASAFAESLWSGNKDERGVKRCGKAVDR
LNLWRYRMVIRGIGAEPIQPLWCLKNPGMCNTVHGALEDK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatctttccaagtttcatgtgatactaatccaattactcttcgtcatttcactt
ctttcgccatttctctccacttcgacacctatcaacatttggccaaagccgagatacctg
tcatggcctcaacatatagccattgtcctctctccaaaattcaccatccttgcccctgaa
caccaatacctttcggcctctgtaacacgctatcacaacctgatccgctctgagaattac
tcgccactcattacacatcctgtcaaatttatgaaaggttacaccttgagcaaccttaaa
gtcattgtgactgatctttctcttccgcttcaccacggcgttgatgagtcttataacctc
tccatccccattggcagctcttcagcccacttgttagctccgtcggtttggggagctatg
catggccttgagacattctctcagatgatttggggaacatctcctgatttgtgcttaccg
gttggcattcatattcaggattctcctttgtttggccacagaggcgttttgctcgataca
tccaggaattactatggagttgatgatataatgagaacaattaaggccatgagtgcaaac
aaactcaatgtcttccattggcatatcactgactcgcaatcttttccgttagtgcttcct
tctgaaccttcactcgctgcaaaaggatcttatggaccagacatggtatacactcctgag
gatgtctctaagattgttcaatatggttttgagcatggagttagagtacttcctgaaata
gacactcctggccatacaggatcgtggggagaagcttacccggaaatagtgacatgtgcc
aacatgttttggtggcctgctggtaaaagttgggacgaacggttagctagtgaacccggg
actggtcagcttaaccccttgaatcctaaaacatatgatgtagttaaaaacgtcatacaa
gatgttgttaagcaatttccagaatctttctttcatggaggtggagatgaagttatccca
agctgttggaaaaccgatcctgccataaaatctttcatgtcctctggtggaacactaagt
cagcttcttgaaaagtacataaactctacattaccttacatcgtgtcacagaaccgtaca
gttgtttactgggaagatgttctgctggatgcacaaatcaaggtggatccatgggttcta
cctaaagagcacataatcttacagacttggaataacggtcctgagaatacaaagagaatc
gtagctgctggttacagagtaattgtctcttcatcagagttctactacttagactgtggt
catggcggttttctagggaatgatagtatatatgatcagcacggaggcggtggtgggtct
tggtgtgcacctttcaagacgtggcagagcatatacaactatgatataacctatggtttg
ctcgatgaggaagagaagaagctggtgctaggaggagaagttgcgttatggtcagagcaa
gctgactcgacggttttagattcacggctttggccccgtgcctctgcgtttgcagagagc
ttgtggtcagggaataaagacgagagaggtgttaagaggtgtggtaaagctgttgaccgg
ttaaacctctggaggtataggatggtgattagagggattggagctgaaccaattcagcca
ttgtggtgtttgaagaatcctgggatgtgtaatacagttcacggcgctcttgaagataaa
taa
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