Capsella rubella (pink shepherd's-purse): 17898544
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Entry
17898544 CDS
T02984
Name
(RefSeq) myosin-5 isoform X1
KO
K10357
myosin V
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
17898544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17898544
04131 Membrane trafficking [BR:
crb04131
]
17898544
03029 Mitochondrial biogenesis [BR:
crb03029
]
17898544
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
crb04812
]
17898544
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
17898544
mRNA cycle factors
P-body specific factors
17898544
Membrane trafficking [BR:
crb04131
]
Others
Actin-binding proteins
Myosins
17898544
Mitochondrial biogenesis [BR:
crb03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
17898544
Cytoskeleton proteins [BR:
crb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
17898544
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
nSTAND3
AAA_16
DUF1664
Zeta_toxin
Flp1_like
TSC22
AAA_22
CCB2_CCB4
RP853
Motif
Other DBs
NCBI-GeneID:
17898544
NCBI-ProteinID:
XP_023645043
LinkDB
All DBs
Position
Unknown
AA seq
1534 aa
AA seq
DB search
MFVFNAMQCSQAAPVITVGSHVWVEDPHLAWIDGQVTRIHGDNIHVKTNQGKTVVTNVYF
PKDTEVPPGGVDDMTKLSYLHEPGVLQNLGTRYELNEIYTYTGNILIAVNPFQRLPHIYE
TDMMEQYKRVALGELSPHVFAIGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYL
AFLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVEIQFDKNGRISGAA
IRTYLLERSRVCQISDPERNYHCFYLLCAAPPEDIEKYQLKNPQSFHYLNQSNCYKLDGI
DDASEYLETRKAMDVVGISNDEQEAIFRVVAAILHLGNINFGKGEAIDSSVVKDEESGRH
LNLAAELLMCDAQSLEDALIRRVMVTPDEIITRTLNPDDAIASRDTLAKTIYSHLFDWIV
NKINTSIGQDPRSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEE
YTKEEIDWSYIEFIDNQDVLDLIEKKPGGIISLLDEACMFPKSKSQDFSQKLFQTFKNHK
RFAKPKLSPTDFTISHYAGEVTYQSDHFIDKNRDYIVAEHQALFTASNCSFVAGLFHSLH
EDSSRSSKFSSIGSRFKQQLHSLMESLNGTEPHYIRCIKPNNVLKPGVFENFNVIHQLRC
GGVLEAIRISCAGYPTRLAFYNFLDRFGLLAPEVLEGNYDDKVACQMILDKKGLRDYQVG
KTKIFLRAGQMAELDARRSEVLGNAARVIQRQFRTCIARKNFRSIRNAAIVLQSFLRGEI
AREVHKKLRIEAAALRFQKNFRRYIDRKSFVTTKSSTIVLQTGLRAMIARSEFRLRRQTN
AAIVLQAHWRGRQAYSYYTRLQKAAIVTQCAWRCRLARRELRMLKMAARETGALKDAKDK
LEKRVEELTWRLQLEKRLRTDLEETKGQEVAKLQETLHTMRLQLKESNEKVVKEQDAARI
AIEEASSVNKEPVVVEDTEKIDSLSNEVDRLKGLLSSETQKADEAKQAYCSTLVQNEELS
KKLEEAGRKIDQLQDSVQRFQEKVFNLESENKVLRQQTLTISPTTRALALRPKTIIIQRT
PEKDAFSNGETTQLQEPETEDRPQKSLNQKQQFSILQENQELLLKSISEDIGFSEGKPVA
ACLIYKCLIHWRSFEVERTSIFNRIIETIASAVEMQENSDVLCYWLSNSATLLMLLQRTL
KASATGSITTPRRRGMPTSLFGRVSQSFRGSPQSAGFPFMNGRVIGGGLDELRQIEAKYP
ALLFKQQLTAFLEKIYGMIRDKMKKEISPLLASCIQALRTKTPRSGLVKGRSQNNFVAQQ
VLIAHWQSIVTCLNGHLRTMRANYVPSLLISKVFGQIFSFINVQLFNSLLLRRECCSFSN
GEYVKTGLAELEKWCHDATEEFVGSAWDELKHIRQAVGFLVIHQKPKKSLKEISTELCPV
LSIQQLYRISTMYWDDKYGTQSVSQEVLASMRHMTSDVTKNTISSSFLLDDDSSIPFSLD
EISKSMQNVEVAEVDPPPLIRQNSNFMFLLERSN
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtttttaatgcaatgcaatgttcgcaggctgctccagtcattactgtgggctca
catgtctgggttgaagatccacatttggcatggattgatggacaggttactcgaattcat
ggtgataacattcatgtcaaaactaatcaggggaaaaccgttgtgacgaatgtatatttt
cccaaggatactgaagttccacctggaggtgtagatgacatgacaaaactttcatacttg
catgagcctggagtcttacaaaacctagggacaagatatgaactcaatgaaatctacacc
tatacagggaatatcctaattgcagttaatccattccaaaggctgcctcatatttatgaa
acggatatgatggaacaatataagagagtagcactcggagaactaagtcctcatgttttt
gcaatcggggatgctgcatatagggcgatgattaatgaaggcaaaagtaattcgattttg
gtaagtggcgaaagtggtgctggtaagactgagacgacaaagatgctcatgaggtacctt
gcctttttgggtgggaggtctggtgtagaaggaaggacagttgaacagcaagtcttagag
tccaatccggttcttgaagcatttggcaatgcaaaaactttacgaaacaacaattcaagt
cgttttggtaaatttgttgaaatccaatttgacaagaatggaaggatatctggggcagct
attaggacttatctgctggagagatcccgtgtttgccaaatctcagatcccgaaagaaac
taccattgcttttatcttctttgtgctgctccgccagaggatatagagaagtaccagctg
aaaaacccacagtcattccattatctgaatcagtcaaattgttataaactggatggtatt
gatgatgctagcgaataccttgaaacaagaaaagctatggatgtagttggaatcagtaat
gatgaacaggaggcaatcttcagggtggttgctgcgattcttcatcttggtaacattaat
tttggaaaaggggaagctattgattcctcggtcgtcaaggatgaagaatccggacgtcat
cttaacttggcggcagagctacttatgtgtgacgcccagagcctagaagatgctcttatt
aggcgtgtgatggttacacctgacgagattatcacgagaacccttaatcccgacgatgca
attgctagtcgggataccctggccaagacaatatattctcacttgtttgactggattgtg
aacaaaattaatacttccatcgggcaggacccaaggtcaaagtcaattattggagttttg
gatatctatgggtttgaaagtttcaaatgcaatagttttgagcaattttgcatcaatttc
acgaatgaaaaattgcaacaacattttaatcagcatgttttcaagatggagcaggaagag
tataccaaagaagagatcgattggagttacatagagtttattgataatcaagatgttctc
gatttaattgaaaaaaaaccaggaggaattatttcacttctagatgaagcctgtatgttt
cccaagtctaaatcccaagacttctcccaaaagttgttccagacgttcaaaaatcacaag
agatttgctaaaccaaagctctctcccactgattttaccatatcgcattatgcgggagag
gttacttatcaatcagaccattttatcgataagaacagggattatatagttgctgaacat
caagcactatttactgcatctaattgctcatttgtggcgggtttgtttcattcacttcat
gaagactcatccagatcatcaaaattttcttccattgggtcacggtttaagcaacaactt
cactcgctgatggaatcacttaatggcacagaacctcattacatcagatgtataaagccg
aacaatgttcttaaacctggtgtctttgagaacttcaacgtcattcatcaattacgttgt
gggggtgttcttgaggccattaggatcagttgcgctggctatcctaccaggcttgccttc
tataactttcttgaccgttttggtctccttgctccagaagttttggaaggaaattatgat
gataaagtagcttgccaaatgattcttgataagaaaggtctgagggactaccaggttgga
aagacaaagattttccttcgagctggtcagatggctgaattagatgcgaggagatcagag
gtacttgggaatgctgccagagtcattcagagacaattccgcacatgtattgccagaaag
aatttccgttctattcgcaatgctgctattgttttgcaatccttcctacgaggcgaaatt
gcccgggaagtacacaaaaaactgagaatagaagctgcagctctaagattccagaagaat
ttccgccggtacatcgacaggaagtcttttgtcaccacaaaatcatcgacaattgtgttg
cagactggcttaagggcaatgattgcacgtagtgaattcaggttaagaaggcaaacaaat
gccgccattgtgcttcaggctcattggcgtggtcgtcaagcatactcatattacacaaga
cttcagaaggcggcaatagtcacgcaatgtgcctggagatgcagacttgctagaagagag
cttaggatgctgaaaatggctgcaagagaaaccggtgctcttaaagatgctaaggataaa
ttggaaaagcgggtagaagagcttacctggcgtttacaattggagaagcggttaaggact
gatcttgaggagacaaaggggcaagaagttgcaaagctgcaagagacattgcataccatg
cggttacaattgaaggaatctaatgaaaaggttgtaaaggaacaggacgcggctcgaata
gcaattgaagaagcaagttcagttaataaggaacctgttgttgttgaagatacagagaag
attgattctttgagcaacgaagttgataggctaaagggactgttgtcatcagaaacacag
aaagcagatgaagcaaagcaggcttattgtagtaccttggtccaaaatgaggaattaagt
aagaaacttgaagaagctggaagaaaaatagatcagcttcaagattctgttcagagattc
caagaaaaggtctttaacttggagtcggagaataaagtacttcggcaacaaactcttact
atctcaccgactaccagagctttagctctaagaccaaaaactatcataattcagagaact
cccgagaaagatgctttctccaatggagaaacaacacaacttcaggaacctgaaactgag
gataggccccaaaaatcgcttaatcagaaacagcagttttccatcttgcaggaaaatcaa
gagctattactaaagtctatttcggaagatataggattttctgaaggcaagcctgttgct
gcctgtctgatatacaagtgtctaatacactggagatcttttgaagtagaaagaaccagt
atctttaatcgtataatcgagacaatagcatctgcagtcgagatgcaggaaaacagcgat
gtactatgctattggttatccaattccgccacactattaatgttgctccaacgcactctg
aaagccagtgctacaggaagcataactactcccagacgtcggggaatgcctacatcttta
tttggacgggtatctcagagcttccgaggttctccacaaagtgccggattcccatttatg
aatggtagagtgattggcggtgggctagacgaactccgtcaaatcgaagctaaatatcct
gctttgcttttcaagcagcaactcactgctttcctagaaaagatatacggaatgatccga
gacaagatgaagaaagagatttctcctttgcttgcttcttgcatccaggctttaaggaca
aagactccacgttctggtttagtaaagggacgttcacaaaataattttgttgcacaacaa
gtgttaattgctcattggcaaagcattgttacatgtctaaatgggcacttgaggactatg
agggccaattatgtgccttcgttgctaatttctaaagtgttcgggcaaatattttcattt
atcaatgttcagttgtttaacagccttcttttgagacgtgaatgctgctcgtttagcaat
ggggagtatgtaaaaacagggcttgcagagctggaaaagtggtgccatgatgcaacggag
gagtttgttggttcggcttgggatgaactcaagcacatcagacaagctgttggcttcttg
gtcatacatcagaagcctaagaaaagcttaaaagagatatctaccgaactttgtccggtg
cttagcattcagcaactgtacaggatcagtactatgtattgggacgacaaatacggtaca
cagagcgtatctcaagaggtgctggcaagcatgcggcatatgacttcagatgtaacaaag
aatacgatcagcagttcgtttttactagatgacgattcgagcatcccattctcgcttgac
gaaatctcgaaatcgatgcaaaacgtagaggttgcagaggttgatcctcctccgttgatt
cgccaaaactccaacttcatgttcttgttggaaaggtcaaattga
DBGET
integrated database retrieval system