Capsella rubella (pink shepherd's-purse): 17898728
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Entry
17898728 CDS
T02984
Name
(RefSeq) rhamnogalacturonate lyase B isoform X2
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
17898728
Enzymes [BR:
crb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
17898728
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
17898728
NCBI-ProteinID:
XP_006306951
UniProt:
R0IBJ4
LinkDB
All DBs
Position
Unknown
AA seq
697 aa
AA seq
DB search
MFLFSSHVFKLVTTKAYRRHLVKQRGWITALVMFMSLFQIAISQNQTPEPEPESTKVLQL
HYQDQHVVMDNGILQLTLSNPEGFVTGIRYNGIENVLATGKEYDRGYWDLVWNFPGKKTK
KTKGTLDRIEATKMEVKTQNEDLIELSFSRTWNTSSSTAVPVNIDKRFVMLRNSSGFYSY
AIFERLQGWPAVELDNIRLAIKLNKDKFHYMAISDDRQRYMPLPDDRIPPRGQPLAYPEA
VKLLDPIEPEFKGEVDDKYEYSMESKDIKVHGWISTNDSVGFWQITPSNEFRSSGPLKQF
LGSHVGPTNLAIFHSTHYVGAELIMNFKQGEAWKKVFGPVFIYLNSFPKGVDPLLLWHEA
KNQTKIEEEKWPYKFIASDDFPASDQRGSVSGRLLVRDRFISSVDIPANGSYVGLAAPGD
VGSWQRECKGYQFWSKAEENGYFSINNVRSGRYNLYAFAPGFIGDYHNDTIFDISPGSKI
NLGDLVYEPPRDGSTLWEIGVPDRTAAEFYIPDPNPSFVNHLYLNHSDKYRQYGLWERYS
ELYPSEDMVYNADVDDHSKQWFFMQVTRKQANGGYNGTTWQIRFQLDDKMKNLTGNFKLR
IALATSNVAELQVRVNDLSANPPLFTTEQIGRDNTIARHGIHGLYWLYNVNVPDSSLRLG
NNTIYLTQPLATSPFQGLMYDYIRLECPDSINYITRS
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgttctcttcacatgtgttcaagctcgtgacgaccaaagcttatcggagacac
ttagtgaaacagagaggatggatcactgctttggtcatgttcatgtctttgtttcaaatt
gctatctctcaaaatcagacccctgagccagaaccagaatcaactaaagtcttacaatta
cattaccaagatcaacatgtggtaatggacaatggtattcttcaattaactttgtcaaat
cctgagggatttgtcaccggaatccggtataacggtatcgaaaatgtgctcgccaccggc
aaagaatatgatagaggttactgggacttagtgtggaactttcctggaaaaaaaactaaa
aagaccaaaggcacactagacaggattgaagcaacaaagatggaagtgaagacgcagaac
gaggatctgatagagctatcgttttcaaggacatggaatacatcttcatccacggctgtt
ccagtgaatatagacaagaggtttgttatgctgcggaactcgtcaggattctatagttac
gccatcttcgagcggttacaaggatggcccgctgttgaactcgataatatccgattagca
attaagctaaacaaggacaagtttcattacatggcgatttcagatgacaggcagaggtac
atgcctttgccagatgatcgaatcccgcctcgaggtcagcctcttgcttatcctgaggca
gttaaacttcttgaccctatagagcctgagttcaaaggagaggttgatgacaagtatgag
tactcaatggagagtaaagacataaaagtacatggatggataagcaccaatgattcagtt
gggttctggcaaatcactccaagcaatgagttccgatcttctggacctctcaagcaattc
ctaggctcccatgtcggtccaaccaacctcgcgatattccacagcactcactatgttgga
gcagaactaatcatgaattttaaacaaggtgaagcatggaagaaagtatttggacctgtc
tttatctatctcaactcttttcctaaaggtgttgatcctctcttgctctggcatgaagcc
aagaaccagacaaagattgaagaagagaagtggccttataaattcatcgcttcagatgat
tttcctgcatctgaccaaagaggatctgttagcggtagattactcgtaagagacagattc
ataagtagtgtggatatacctgcaaatggttcctacgtgggcttggctgcgccaggagat
gttggctcatggcaaagagaatgcaaaggttatcagttctggtcaaaagcagaagaaaat
ggatatttttctatcaataatgtgagaagtggtcgttataatctatatgcatttgctcct
ggattcattggtgattaccacaatgacaccattttcgatatttctccaggctcaaagatt
aaccttggggacttggtgtatgaacctcctagagatggttcaactctatgggaaatcggt
gtaccagaccgaaccgctgcagagttctacattcctgacccgaatccaagctttgtaaac
catctatacttgaaccattctgataaataccgacagtacggattgtgggaaaggtattca
gaattgtaccccagtgaagatatggtctacaatgctgatgttgatgatcactctaaacaa
tggttcttcatgcaagttacaaggaagcaagcaaatggagggtataacggtacaacatgg
cagatcagatttcaactcgatgataaaatgaaaaacttaaccgggaacttcaaattacga
attgctctagctacatcaaatgtagcagaattgcaggttcgggtgaacgatctttctgca
aatccaccattgtttacaaccgagcaaataggaagggataatacaatcgcaaggcatggt
attcatggactatattggttatacaatgtgaatgtgcctgattcttctcttcgcctggga
aataacaccatatatctaactcaaccgctagccacaagcccttttcaaggactcatgtat
gattatattcgtctagaatgtcctgattccataaattatataactagatcatag
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