Capsella rubella (pink shepherd's-purse): 17898777
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Entry
17898777 CDS
T02984
Name
(RefSeq) 3-ketoacyl-CoA synthase 1
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00062
Fatty acid elongation
crb01100
Metabolic pathways
crb01110
Biosynthesis of secondary metabolites
crb04626
Plant-pathogen interaction
Module
crb_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
17898777
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
17898777
Enzymes [BR:
crb01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
17898777
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Ortholog
Paralog
GFIT
Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
ACP_syn_III
Chal_sti_synt_N
DUF8023
Motif
Other DBs
NCBI-GeneID:
17898777
NCBI-ProteinID:
XP_006306361
UniProt:
R0IA01
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MERTNSIEMDRERLTAEMAFKDSSSAVIRIRRRLPDLLTSVKLKYVKLGLHNSCNLTTIL
FFLIILPLAGTVLVQLTGLTFDTLSELWSNQAVQLDGATRLACLVFLCFVLTLYVANRSK
PIYLVDFACYKPEEERKISVDSFLTMTEENGSFTDDTIQFQQRISSRAGLGDETYLPRGI
TSKPPKLNMSEARAEAEAVMFGALDSLFEKTGIKPAEVGILIVNCSLFNPTPSLSAMIVN
HYKMREDIKSYNLGGMGCSAGLISIDLANNLLKANPNSYAVVVSTENITLNWYFGNDRSM
LLCNCIFRMGGAAILLSNRRQDRKKSKYSLVNVVRTHKGSDDKNYNCVYQKEDERGTIGV
SLARELMSVAGDALKTNITTLGPMVLPLSEQLMFLISLVKRKMFKLKVKPYIPDFKLAFE
HFCIHAGGRAVLDEVQKNLDLKDWHMEPSRMTLHRFGNTSSSSLWYEMAYTEAKGRVKAG
DRLWQIAFGSGFKCNSAVWKALRAVSTEEMTGNAWAGSIDDYPVKVVQ
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggagagaacaaatagtatagagatggatcgagagaggttaacggcggagatggcgttt
aaagattcatcatcggccgttataagaatccggagacgtttgcccgatttgttaacgtcc
gttaagctcaaatacgtgaagcttggacttcacaactcttgcaacctcaccaccattctc
ttttttcttatcattcttcctttagccggaaccgtcctggttcagcttaccggtcttacc
ttcgatacgctctccgagctttggtctaaccaggcggttcaactcgacggggccacgaga
ctcgcctgcttggttttcctctgtttcgttttgactctctacgtggctaaccggtctaaa
ccgatatatcttgttgatttcgcatgctacaaaccggaagaggagcggaaaatatcggtg
gactcgttcttgacgatgacggaggaaaacggatccttcactgatgacacgatccagttc
cagcaaagaatctcgagccgggccggtttaggagacgagacttatctgccacgtggcatc
acctcaaaaccccccaagctaaacatgtcggaggcacgtgcggaagctgaagccgttatg
ttcggcgccttagactccctcttcgagaaaaccggaattaaaccggccgaagtcggaatc
ttgattgtaaactgcagcttattcaatccgacgccgtctctatcagctatgatcgtcaac
cattacaagatgagagaagacatcaaaagctacaacctcggaggaatgggttgctccgcc
ggattaatctcaatcgatctcgctaacaacctcctcaaagcaaaccctaactcttacgct
gtcgtggtaagcacggagaacataaccctaaattggtacttcggaaatgaccggtcaatg
cttctctgcaattgcatcttccggatgggcggagccgcgattctcctctctaaccgccga
caagaccggaagaagtcaaagtactcgctggtcaacgtcgttcggacacataaaggatca
gacgacaagaactacaattgcgtgtaccagaaggaggacgagagaggaacaatcggtgtc
tctttagctcgagagctcatgtctgtcgccggagacgctctaaagacaaacatcacaact
ttaggaccgatggttcttccattgtcggaacagttgatgttcttgatttcgttggtcaaa
aggaagatgttcaaactcaaagtgaagccgtatatcccagatttcaagctagctttcgag
catttttgtattcacgcagggggtagagcggttcttgacgaagtgcagaagaatcttgac
ctcaaagattggcacatggaaccttcaagaatgactttgcaccggtttggtaacacttcg
agtagctcactttggtatgagatggcttataccgaagctaagggccgggtgaaagctggt
gatcgactttggcagatagcgtttgggtcgggttttaagtgtaacagtgcggtttggaaa
gcgttacgagcggtctcaacggaggagatgactggtaacgcgtgggctggttcgattgat
gattatccggttaaagttgtgcaataa
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