Capsella rubella (pink shepherd's-purse): 17898960
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Entry
17898960 CDS
T02984
Name
(RefSeq) nuclear poly(A) polymerase 1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
17898960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17898960
Enzymes [BR:
crb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
17898960
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
17898960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
17898960
NCBI-ProteinID:
XP_023633174
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MSSVQQNGQRFGITEPISLGGPAELDVIKTRELEKYLQDVGLYESDEEAVKREEVLGILD
QIVKTWIKTISRAKGLNDQLLHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREGD
FFGELQRMLSEMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDISQDS
ILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGIN
WALLVARICQLYPNALPNMLASRFFRVYNQWRWPNPVLLCSMDEGSLGLQVWDPRRNPKD
RLHIMPIITPAYPCMNSSYNVSASTLRIMTGEFQRGKEICEAMETNKADWDTLFEPFAFF
EAYKNYLQIDISAANVDDLRKWKGWVESRLRQLTLKIERHTYDMLQCHPHPHDFQDASRP
LNCSYFMGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNGYMLWIPGMEISVSHIKRRSLPN
FVFPGGIRPSHTSKGTWDSKRRSEHRISSAAVSNTTTTTTTEMSSESKAGSNSPGDGRKR
KWGADEALTDQPKPSKHIAVSVPVENSEGGSPNPSVGSICSSPMKDYCTNGKSDHISKDS
VDKVVVFSKDPAESLPIEKIATPQAPSQEAEELEESGDFGNQMIQQITLQDAIPMATATI
PPLEATTLNGSLFPNEAVEELEVLPMRQPEVAHRASVQQRKPIIKLNFNSLGKTNGK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtgtccagcaaaatgggcagaggtttggcattacagaacctatctctttggga
ggaccagcggagcttgatgtgattaagaccagagagctcgagaagtacttgcaagatgtt
ggattgtacgagagtgatgaggaagctgttaaaagggaggaagttctggggatactagat
cagattgtaaaaacatggattaaaacaatcagccgcgccaaaggcttgaatgatcagctg
cttcatgaggcgaatgcaaagatatttactttcggttcttatcgactaggggtacatgga
cctggtgctgatatagacactttatgcgtcggacctagacatgcaactagagaaggtgat
ttctttggtgagctacaaagaatgctgtcagaaatgcctgaagtaactgaactgcaccct
gtgcctgatgctcatgttccattgatgggattcaaacttaatggagtttctatagatctc
ctttatgcacaacttccactctgggttatacctgaggacttagatatatcacaggactcc
attctacagaatgctgatgagcaaactgttcgaagccttaacggttgtagagttactgac
caaatcttgcgtctggttccaaatattcagaatttcaggacaacactaagatgcatgcga
ttttgggccaaacgtcgtggagtatactctaatgtctcgggatttcttggtggtataaat
tgggcgttgcttgtagcccggatatgtcagctttatcctaatgccctcccgaatatgtta
gcatctaggttctttagggtctacaatcaatggcgttggccaaatcccgttcttctttgt
tctatggatgaaggatccctcggtcttcaagtttgggatcctagaagaaacccaaaggac
cggttgcatataatgcccattattactcctgcttacccatgtatgaactccagttataat
gtctctgcaagtacattgcggattatgacaggagagtttcagagaggaaaagaaatatgt
gaggctatggaaacaaacaaagctgattgggataccctttttgagccatttgcattcttt
gaagcgtataaaaactatcttcagatagacatctctgctgcaaatgtcgatgatctaaga
aaatggaaaggctgggttgagtcacgcctccgccagcttacactgaagattgagagacat
acttatgatatgcttcagtgccaccctcatccccatgattttcaagacgcatcccgacca
ctcaattgctcttacttcatgggtctgcaacggaaacaaggagttcctgcagcagaaggc
gagcaatttgatattagaagaacagtcgaggagttcaaacacactgttaatggttacatg
ttgtggattcccgggatggagattagtgtcagccatataaaacggagaagcttacctaat
tttgtttttcctggtggaattagaccttcacatacctctaaaggaacatgggacagcaaa
cgccgttcagagcacagaatttcttctgcagcagtttctaatactacaactactactact
actgaaatgagttctgaaagtaaagctgggtctaacagtccaggagatgggaggaaaaga
aaatggggagctgatgaagcactaaccgatcagccaaagccctctaaacacattgctgtt
tcagtgcctgtagagaattctgagggcgggagcccaaatccatctgttggatccatttgt
tcaagtcctatgaaagattattgtacaaacggtaaatctgatcatatcagtaaggattca
gtagataaggttgttgttttcagtaaggatccagcagagagtcttccgatagagaagata
gccactcctcaagctcctagtcaagaagcggaggagcttgaagaaagtggtgattttgga
aatcaaatgatacagcagataactcttcaagatgcaatcccgatggctactgcaactata
cctccattagaagctactaccttaaatggctctctatttcccaatgaagcagtggaagaa
ctcgaggttcttcccatgcgacagcctgaggtggcacatagagcttcagtacaacagcgg
aaaccgataataaaattgaacttcaactctctaggcaaaaccaatggcaagtaa
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