Capsella rubella (pink shepherd's-purse): 17899122
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Entry
17899122 CDS
T02984
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00906
Carotenoid biosynthesis
crb01100
Metabolic pathways
crb01110
Biosynthesis of secondary metabolites
Module
crb_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
17899122
Enzymes [BR:
crb01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
17899122
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Paralog
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
HI0933_like
Thi4
GIDA
Pyr_redox_2
GMC_oxred_N
Motif
Other DBs
NCBI-GeneID:
17899122
NCBI-ProteinID:
XP_006307051
UniProt:
R0IBW2
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MNLCFQSPVECGHRSSSFSALKTSNFGCYKLGSSNLGFHVRVFENRKTKQPKVTVNSVSS
SAVGTVERTERDERRGGESVYDAIVIGSGIGGLVAATQLAVKEARVLVLEKYLIPGGSSG
YYEREGYTFDVGSSVMFGFSDKGNLNLITQALKAVGRKMEVIPDPTTVHFHLPNDLSVRI
HREYDDFIAELTSKFPHEKEGILGFYGDCWKIFNSLNSLELKSLEEPIYLFGQFFQKPLE
CLTLAYYLPQNAGAIARKYIKDPQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHYGG
INYPVGGVGGIAKSLAEGLVDQGSDILYKANVKSIILDDGKAVGVRLADGREIFAKTIIS
NATRWDTFGKLLKGEKLPKEEENFQKVYVKAPSFLSIHMGVKAKVLPPDTDCHHFVLEDD
WKNLEEPYGSIFLSIPTILDPSLAPDGRHILHIFTTSSIEDWEGLPPKEYEAKKEEVAAR
IIQRLEKKLFPGLSSSITFKEVGTPRTHRRFLARDKGTYGPMPRGTPKGLLGMPFNTTAI
DGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSRVLDVGLLGLLGWLRTLA
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgtgttttcaaagtcccgtagagtgtggtcatcgtagttcctccttctccgcg
ttgaagacctcgaatttcgggtgttacaaactgggttcttcgaatttagggtttcatgtt
cgagtttttgagaatcggaagacgaagcagcctaaggttacggtgaattctgtttcttca
agtgcggttggtacagtagaaaggacggagagagatgaaagaagaggaggcgagagtgtg
tacgacgccattgtcatcggctctgggattggagggttggttgctgcgactcagctagct
gtcaaagaagctagggttttagttctggagaagtatttgattcctggtgggagctctggc
tattacgaaagagagggatatacttttgatgttggctcttctgtgatgtttggtttcagc
gataaggggaacctgaacttgattactcaggcgttgaaggcagttggccgcaagatggag
gttatacctgatcctaccactgtccatttccatcttcccaatgatctctctgttcgtatc
catagagaatacgatgacttcatcgctgaacttaccagcaagtttccccacgaaaaggaa
gggatccttggattctatggcgactgctggaagatcttcaactcattgaactccctggag
cttaagtcactagaagagcctatttacctttttggacagttctttcagaaaccgcttgaa
tgcttaacactcgcttattatttgccgcaaaatgctggggccatagctcggaagtacata
aaggatcctcagctattgtctttcattgatgcagagtgtttcattgtgagcacagtcaat
gctctacagacgccaatgatcaatgcaagtatggttttatgtgacaggcactacggagga
attaactacccggttggtggcgttggtgggattgccaagtctttggcagaaggacttgtt
gatcagggcagtgacatactctacaaagctaatgtgaaaagcataatacttgatgatgga
aaggctgtcggtgttaggctagcagatggaagagaaattttcgccaaaacaataatttca
aatgctacaagatgggatacatttgggaagcttttaaaaggagaaaaacttccaaaagaa
gaagaaaatttccagaaagtctatgtcaaggctccatcatttctttcaatccacatgggt
gttaaagcaaaggttctccctccagatacagattgccatcattttgtgctagaggacgat
tggaagaatctagaggagccttatggtagtattttccttagcattccaaccattcttgat
ccatctttggctccagatggtcgacatatacttcacatatttacaacttcctcaattgag
gattgggagggactccctccaaaagagtatgaagcaaaaaaggaagaagtggcagctagg
ataatacagaggctagagaaaaagctgtttccagggctcagttcatctattacgtttaaa
gaggtgggaacaccaaggacacacagacgatttcttgctagggataagggaacttatggg
ccaatgccgagaggaaccccaaaaggtttattaggcatgccgttcaatacaacggctatt
gatggtctatactgcgtgggggatagctgctttcctggtcagggagttatagctgtggca
ttttcaggagtgatgtgtgctcatcgggtagctgctgatattgggcttgagaagaaatca
cgggtacttgatgttggccttcttggtttacttggttggctaaggacactcgcataa
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