Capsella rubella (pink shepherd's-purse): 17899175
Help
Entry
17899175 CDS
T02984
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
17899175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crb03021
]
17899175
03036 Chromosome and associated proteins [BR:
crb03036
]
17899175
Transcription machinery [BR:
crb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
17899175
Coactivators
SAGA/TFTC/STAGA complex
17899175
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
17899175
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
TAF10
EOS1
SDH_protease
Motif
Other DBs
NCBI-GeneID:
17899175
NCBI-ProteinID:
XP_023633095
LinkDB
All DBs
Position
Unknown
AA seq
709 aa
AA seq
DB search
MAPPDSSMDLSIVKLLEEDDKDDAKHSEYDLEVFQKALIRDIEELKQTQSTKLQTMSSPQ
AHRVEQPVVPVNHGLTLAQVCDLLRILVDQNKDRKSYFQTLYNKFKGKEITTEGLIQNLK
AAVGDQMIRSAISKLHQQQPVNPRVKVPGRQNHDIVSKSAETSAQESDPREVQVNQPPST
TSGTLSSSATVQGLNKQPKQYMQLSSSSFHMGTNSGSLNSYPGTNVNSPGSLPSARLPHF
QHISYNQNVVPASVQGPTKSTINMTTIPKIKRPTSINGPSRVQDGPVSNFQNNSSLPLYS
SPWQESVTKDHTVGPSSSVVHVKQKLIDQSFDQAQKPHSLVKQGMNTVLLEQHNAIPISS
NDELEKQSSKMFLSTSASSVFPSTTTQLDSSKMVYLPPPSGTITTATNVRKTSDMPSIGQ
KKPLEALGSSMPPSRKKRKQCGTSSDRSIKKFNDVTAVSGINLQEEEKNLLGSWPKKNSR
VSKASQRFVQEEEEKTFLQKIPLQRKLTEIMAKSGLKHIDHDVERCLSLCVEQRMRGLLS
NIIRMSKLLLQRTDPEKCRNQTFITSDIRKEINEMNQKVKEEWEKKHGGEEKAKNEDNHS
KQVTAKEDADQRRAKAANVAVHAAVGGDDMFSKWKLMAEARQKSSLGPGKNSKTLSSEIG
GTRFGKNQGLPKVVRSISVKDVIAVVEQEPQMSRSTLLYRLYNKICSDV
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgccagattcctccatggatctctccattgtcaagctcctcgaagaagacgac
aaggatgacgctaagcattcggaatatgacttggaagtgtttcagaaagctctgattcga
gatatcgaagaattaaagcaaactcagtctacgaaactgcaaacgatgagtagcccacag
gctcatagggtggaacagcctgttgtccctgtgaatcatggtcttacactagcacaagtt
tgtgatttgcttcgtatcttagtagaccaaaacaaagatagaaagagttattttcaaacc
ctgtataataaattcaagggaaaagaaataacaacagaggggctcatacaaaatctgaag
gctgctgttggtgatcagatgatcagatcggcaattagcaaattgcatcagcaacaaccg
gttaatccgagggtcaaagtacctggacgccaaaaccatgacatagtgtctaaatctgct
gaaaccagtgctcaagaatcagatcctcgtgaagttcaagttaaccaaccgccttctaca
acttcaggcaccttaagcagttcagctactgtgcagggcttaaataagcaacccaagcaa
tacatgcagctttcatcaagttcttttcatatgggtaccaactctggaagtcttaattca
tacccagggacaaatgtcaattctcctggttcattgccgagcgcgagacttcctcatttc
cagcacatctcttataatcagaatgtggtaccagccagtgttcaaggaccaaccaagtct
actataaacatgacgacaatacccaagattaagaggccaacttctataaatggcccaagt
agggttcaggatggtcctgtatccaacttccaaaacaactcatccctgcctctatattct
tctccttggcaagaatcagtcaccaaggaccatacagtgggcccttcgtcatcagtggtc
catgtgaagcagaaattgattgatcaaagttttgaccaggcacagaagcctcattctttg
gtgaagcaaggcatgaatactgttctactggaacagcacaatgcaattccaattagttca
aatgatgaattggagaagcagtcttctaaaatgtttttatccacctctgcaagctctgtt
tttccttcaacgacaacacagctggactctagcaagatggtatatctccctcccccatct
ggaaccataacgacagcaactaatgtcaggaagacatcagacatgccttctattggtcag
aaaaaacctcttgaggccctaggttcttcgatgccaccatcacgaaagaaacgaaaacaa
tgtggaacttcttcagatcgaagtattaaaaaatttaatgatgtcactgctgtcagtggc
atcaatcttcaggaagaggaaaaaaatttattaggttcttggcccaaaaagaacagtcgt
gtttctaaagcatcccaaagatttgtgcaggaagaagaagaaaaaacgtttttgcagaaa
attccactgcagagaaagctgacagaaattatggcaaaaagtggtttaaagcatatagac
catgatgtagagcggtgcttgtctctgtgcgtggagcaaaggatgcgaggactattgtcg
aatataatacgaatgtcaaagctgcttttgcagcggactgatcccgagaagtgtagaaac
cagacttttatcacatctgatatccggaaagaaattaatgaaatgaatcagaaggtgaaa
gaggaatgggaaaagaaacatggtggagaagaaaaggctaagaatgaagacaaccattca
aaacaagtgacggcaaaggaggacgcagatcaaaggagagctaaggctgcaaatgttgct
gttcatgcagccgttggaggagatgatatgttttcaaaatggaaacttatggcagaagca
cgtcagaaatcttctctagggccaggaaaaaactccaaaacactctctagtgaaattggt
ggtacacgatttggaaagaaccagggtttaccaaaagtagtccggtcaatctctgtgaaa
gatgtgattgctgtggtggaacaagagcctcagatgtcgagatcgacgctattgtatcgc
ttatacaataaaatctgctcggatgtttga
DBGET
integrated database retrieval system
