KEGG   Capsella rubella (pink shepherd's-purse): 17899217
Entry
17899217          CDS       T02984                                 
Name
(RefSeq) TATA-box-binding protein 2
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    17899217
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:crb03000]
    17899217
   03021 Transcription machinery [BR:crb03021]
    17899217
Transcription factors [BR:crb03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    17899217
Transcription machinery [BR:crb03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     17899217
  RNA polymerase III system
    TFIIIB
     17899217
  RNA polymerase I system
    SL1/TIF-1B
     17899217
SSDB
Motif
Pfam: TBP DUF3378 DUF4295 Beta-Casp
Other DBs
NCBI-GeneID: 17899217
NCBI-ProteinID: XP_023645939
LinkDB
Position
Unknown
AA seq 200 aa
MADQGMEGSQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHSAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKMRDE
TYTAFENIYPVLSEFRKVQQ
NT seq 603 nt   +upstreamnt  +downstreamnt
atggctgatcaaggaatggaagggagccaacctgttgaccttactaagcatccctctggg
attgttccaactcttcagaatattgtctcgacagtgaacttagactgcaagcttgatctt
aaagccatagctttgcaggctcggaatgctgaatataaccccaagcgttttgctgctgta
attatgaggataagagagccaaagactacagcgttgatctttgcatctgggaaaatggtg
tgcactggagctaaaagtgaacatctttcaaagctggctgcaagaaagtatgctcggatt
gttcaaaagcttggctttcctgcaaagttcaaggatttcaagattcagaacattgtaggc
tcctgtgatgtcaaattccccattaggcttgaaggtcttgcatactctcatagtgctttc
tcaagttacgagcctgagctatttccaggattgatatataggatgaaacaaccaaagatt
gttctgcttatttttgtgtcaggaaagattgttataactggagccaagatgagagatgag
acttacaccgcatttgagaatatctacccagttctgtcagagttcaggaaagtccagcaa
taa

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