Capsella rubella (pink shepherd's-purse): 17899349
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Entry
17899349 CDS
T02984
Name
(RefSeq) homeobox-leucine zipper protein HDG10
KO
K09338
homeobox-leucine zipper protein
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crb03000
]
17899349
Transcription factors [BR:
crb03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
17899349
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
TUSC1
Motif
Other DBs
NCBI-GeneID:
17899349
NCBI-ProteinID:
XP_006303739
UniProt:
R0GL00
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
MYSSSREDSSANERETSSGDTNANQEGSNHQHHSHHQTLSLEQYFTEREHPNSAQRHQLA
EELNMKPEQIKFWFQNKRVQTKMNNEKAENAELRIDNLTLQCENEAMEQAMKTVVCPPCG
GRNPGREEQLCHLENLRSENTFLQREHERLSSYVTQHRGSRLSIHGPSTYGSTSRTRPTP
YGSSSNHRPKQSSLLRGPYARENINITPVPKPRKLVQLQHFQPMSRQEKAEMIETAENAV
AEVMSLIRMDEPMWVKSPIDGRFVLDPVNYGSIFGKMSQFKTTSVCPRESSKEVVVVPMD
ATNLVDMLFDTEKWARLFPTIVNEAKTVHVLETINRRRPTFSRVIYENLHMLSPLVPPRE
FLILRTCQKMEDNLWLIADVSCHHRNIDYDSPVCTKRPSGVLIQGLAHGCSKVTWIEHVE
VSNNLQPHRLYRDLLNSCFGYGARRWTVTLERMCERLSLYSMHEVPAADYVGVVRTIHGR
RSIMNLGERMLKNFAWIMKMATKLDFSRPSDADNSKIRISVRTNTQAGQPVGLIVCASSS
LSLPVPPVQVYNLLKNLEVRNQWDVLCHGNPVIEATRFVTGLKKKNNVTFLQTSSEGDNT
EMMILQDSFIDELGGMVVYAPMDLKTAYAAISGDVDPSTIPILPSGFIISRDSRSFPGEQ
DGRCMTLLTLAFQILVSGSISSTELNLGDATTTVETLINCTVQRVKAMLNCG
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtattccagcagccgtgaagactcttcagctaatgaaagagaaacatcttctggtgac
accaatgccaatcaggaggggagcaatcaccaacaccactctcatcatcaaactcttagt
ctcgagcagtactttactgaacgtgaacatccaaacagtgcgcagcgacatcaactggct
gaagaactcaatatgaaaccagaacaaatcaaattttggtttcaaaacaagagagtccaa
accaagatgaataatgaaaaagcagagaatgcagagcttagaattgataacttgacactg
caatgtgagaatgaagcaatggaacaggcaatgaagactgtggtctgccctccatgtggt
ggccgtaatcctgggagagaagagcaactatgccatctcgaaaatttgcgctcggagaac
acctttctccaaagagagcatgaaagactctcaagctacgttacccaacacagaggctca
agacttagcatccatggtccatcaacctacggatcaacctccaggactcgtcctactcca
tatggaagctcttctaaccatcgtcccaaacaatcaagcttgttaagaggaccatatgct
cgtgaaaacatcaacatcactccagtgcctaagccgcgaaaactagtacagttgcagcat
ttccaaccgatgtctcgacaggagaaagctgagatgattgaaaccgcggaaaatgccgtg
gcagaggttatgagtctcattcgaatggatgaaccaatgtgggttaagtcacctattgat
ggtaggttcgtccttgatccagtgaactatgggagcatttttggtaagatgagccagttt
aagactacaagtgtttgtcctcgtgagtcttccaaggaagtggtcgttgttccaatggat
gcaacaaatttggtcgacatgctctttgatacggagaaatgggcgaggctgtttccaaca
attgtaaatgaagcaaagacggttcatgtgttggagaccattaaccgtcgaagaccaact
ttctcaagagtgatatatgagaacctgcacatgttgtcaccattggtgccacctagagag
tttctaatactcagaacctgtcaaaaaatggaagataatctctggttgattgctgatgtt
tcctgtcatcaccgaaacattgattatgattctcccgtttgcaccaaacgtccctcaggt
gtactgatacaaggcttagcccatggttgctctaaggttacttggattgagcatgtggaa
gtgagtaataatctgcagccacatcggctttacagagacctcttgaacagctgttttggc
tacggggctcgacgttggactgttactcttgagaggatgtgtgagaggctgtctctctac
tctatgcatgaagtcccagccgctgactacgtcggagttgtgagaacaatacatggaaga
aggagcataatgaatttgggagaaagaatgttgaaaaactttgcttggatcatgaaaatg
gctaccaaactcgatttctcgcgaccatcagatgctgataacagcaaaattcggatctcg
gtgcggacaaacacacaggccggtcaaccggtcggtctcattgtctgcgcaagttcatcc
ttatctctccccgtccctccagtccaagtctacaatctccttaagaatctggaggttcgt
aaccagtgggacgttctctgccatgggaatccagtgattgaagctactcgttttgtcacc
ggattgaagaaaaagaacaacgtcacttttctccagacatcaagtgaaggggacaatact
gagatgatgatactacaagatagcttcatagatgaattgggaggtatggttgtctacgct
ccaatggacctaaagacggcgtacgcagccatttctggtgatgttgatccttccaccatt
cccatcctcccgtccggtttcatcatctcccgcgacagccgctctttcccgggggagcag
gacggccgctgcatgacactcctcaccttggctttccagatccttgtctccggttcgatt
tcttctactgaactcaacttgggagatgctaccaccactgttgagaccttgattaactgc
accgttcaaagggtcaaggcaatgcttaactgcggatga
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