Capsella rubella (pink shepherd's-purse): 17899477
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Entry
17899477 CDS
T02984
Name
(RefSeq) zinc finger CCCH domain-containing protein 4
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
17899477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crb03041
]
17899477
Spliceosome [BR:
crb03041
]
Complex B
Other components
Prp19-related factors
17899477
Complex C
17899477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
RRM_1
zf-CCCH_RBM22
Torus
zf_CCCH_4
zf-CCCH_2
RRM_occluded
zf-CCCH_3
RRM_3
zf-CCCH
zf-CCCH_10
zf-CCCH_4
RRM_YTH1
zf-CCCH_PARP12
RRM_5
Motif
Other DBs
NCBI-GeneID:
17899477
NCBI-ProteinID:
XP_006307299
UniProt:
R0GW62
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MAHRILRDHEADGWERSDFPIICESCLGDNPYVRMTKANYDKECKICTRPFTVFRWRPGR
DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALNISTHDSIPKSDVNREYFAE
EHDRKTRAGLDYESSFGKMRPNDTILKLQRTTPYYKRNRAHVCSFFIRGECTRGAECPYR
HEMPETGELSQQNIKDRYYGVNDPVAMKLLGKAGEMGTLESPEDESIKTLYVGGLNSRIL
EQDIRDQFYAYGEIESIRILADKACAFVTYTSREGAEKAAQELSNRLVVNGQRLKLTWGR
PKPDQDSNLQGSVAHSGLLPRAVISQQHNQPPPVQQYYMHPPPAANQDKPYYPSMDPQRM
GAVISTQEAGGSSTSENKGASSSSYMMPPHQSYPPPPYGYMPSPYQQQYPPNHQHHPGPM
HHYAPPPAAYPYPQQPGPGSRAAPSPTAVSAPSPDSAPSGSAGAPSGSAQPPPAASTTTD
SSQ
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggctcacagaatactgagagatcatgaggccgatggatgggaacgctccgatttccca
atcatctgcgaatcgtgtctcggtgacaacccctacgtgcgaatgactaaagcgaattat
gataaggaatgcaagatatgtacacgtcctttcacggtgtttaggtggagaccaggccgg
gatgctagatacaagaagactgagatttgtcagacttgttgcaaactgaaaaatgtgtgc
caagtttgtcttctggatcttgagtatggtcttcctgttcaggtcagggacacagcactc
aacattagtactcatgactctatccctaaaagtgatgtcaacagagagtactttgctgaa
gaacacgacaggaagaccagagctggactggattatgaatcttcattcgggaagatgcga
cctaatgatactatcttaaagctccaaagaacaacaccatactataaaaggaatcgggca
catgtttgtagtttcttcatcaggggtgagtgtacaagaggtgccgaatgtccttaccgg
catgagatgcccgaaacaggagaactgtcccagcaaaatattaaagaccgttattatggt
gtcaatgatccagttgctatgaagttacttggaaaagctggtgagatgggcactttggaa
tcaccagaggatgaaagcatcaaaacgctttacgtcggtggattgaactctagaatcctt
gagcaagacatacgagaccagttttacgcttatggagaaatcgaatctatcagaatcttg
gctgacaaagcctgtgcatttgtcacatacacatcccgtgaaggtgcagagaaggccgcg
caagagctctccaacaggcttgtcgtcaatggtcagaggctaaaactcacatggggaagg
cccaaacctgaccaagatagcaacctacagggcagtgtggctcatagtggtttactacct
cgagcagttatatctcagcaacacaatcaacctccaccagtgcagcagtactatatgcac
ccaccaccagcagctaaccaagacaaaccttattacccatcaatggacccgcagagaatg
ggtgcagtaatttcaactcaagaggctggtggttcaagcaccagtgagaacaagggagct
tcttcttcttcttacatgatgcctccacaccagtcatacccaccaccaccgtatggatat
atgccgtcgccttaccagcagcagtatcctcctaaccatcaacatcaccctggtcctatg
caccactatgccccgcctccagcagcttacccgtaccctcagcaacctggtcctggatca
agggctgcaccatctccaaccgcggtctctgctccatcacctgactctgcaccttctggg
tctgcaggagcaccttcaggatccgctcaaccaccccctgctgcctcaactacaactgat
tcctctcaatag
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integrated database retrieval system
