Capsella rubella (pink shepherd's-purse): 17899491
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Entry
17899491 CDS
T02984
Name
(RefSeq) putative tRNA pseudouridine synthase Pus10
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crb03016
]
17899491
Enzymes [BR:
crb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
17899491
Transfer RNA biogenesis [BR:
crb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
17899491
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
17899491
NCBI-ProteinID:
XP_006307295
UniProt:
R0IS63
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MSDETVPAGGDSVSLPNGLVSHGDSKTRRVYETARSLHSGAVKDLLSLGVCERCIFRLVA
VEAFDSDVSSVSTSALRSWLNAVDDETGSSESSCSRICIVCLGILQFVFSDAEQKLVKAD
TSSDYVARITDLVKQDRHEFDSFGLEVSVPSTITDNERAVLSYLKGKYSDEGWLQRDKIS
VKDALKFLVLDPLKASLGAQSDSSSFHIRLTYSEASDEAPGVSKTTHESKRRKTDAENGS
NSISENSFEKVYEPCIFSVHCNKMPIFFSGRYFKYSRNVSQSRWIIDDERMGEASVEEIL
GGNILPACLGDSYKFHAAGREDIDVRMLGSGRPFLIEVQNSRQCPSEQSLKEIEEKINNS
EKKLVGVKDLKCIGSQCWAMMREGEAEKQKQYVALVWISRPLEEKDFNSISSLKELKILQ
KTPVRVLHRRSPLDREKIIHWMKVDKIKGHSQYFLLHLCTQAGTYIKEFVHGDLGRTTPS
MGSILGCRAEIIQLDVTDVKMGDS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgaaacagtacctgccggcggcgactcagtgagcttgcccaacggcctcgta
agccatggtgactctaagactcggcgcgtgtacgaaacagctcgatctctgcattctggt
gctgtcaaagatcttctatcactcggggtctgcgagagatgtatattccgattggtagcc
gtcgaggcttttgattctgatgtctcttcagtctcgacttcagctctacgcagctggcta
aacgccgttgatgatgaaacaggttcatcggaatctagttgttctagaatctgcattgtt
tgtttaggtatattgcaattcgttttttccgatgctgaacaaaagctggtgaaagcggat
actagtagtgattacgttgcaaggataacggacttggtgaagcaggatcgtcatgagttc
gatagctttggtcttgaagtctctgtgccatcgactatcacggacaatgaacgtgcagtc
ttgtcataccttaaaggaaagtatagcgacgaaggttggctgcagcgcgacaaaatttct
gtaaaggacgccttgaaatttctagtcttggatccacttaaagcatcattgggcgctcaa
tcagattcaagctcttttcacatccgtttgacatactctgaagcatcagacgaggctccg
ggtgtttctaaaacaacacatgaaagtaagaggaggaaaacagacgcagagaatggatca
aattctatttcagagaattcatttgaaaaggtgtatgaaccatgcatcttttcagttcat
tgcaacaagatgcctatcttttttagtggtagatactttaaatactccagaaatgttagt
caatcacgatggattattgatgatgaaagaatgggcgaagcatctgttgaggagatactt
ggtggaaacattcttccagcatgccttggggattcctacaagttccatgctgctggcaga
gaagatattgatgtacggatgttgggttcaggtagacctttcttaatcgaagttcagaat
tcccgccagtgcccatctgaacagtcattgaaggagattgaagaaaagataaataactca
gaaaaaaaactagtcggagtaaaagaccttaaatgtatcggaagtcagtgttgggcgatg
atgcgtgaaggagaagcagagaagcagaagcagtatgttgcacttgtatggatttctcgg
ccacttgaagagaaagacttcaattcaatttcttccttgaaagaactgaaaatcttgcag
aagacaccagtaagagtgcttcaccgacgaagtccattggaccgtgaaaagattatacat
tggatgaaagtcgacaagataaaaggacactctcagtactttctattgcatctatgcact
caggctgggacatacatcaaagaatttgtacacggggatcttggtcgtaccactcccagc
atgggatcaattttaggttgcagggctgagattatacagctagatgtgactgatgtgaaa
atgggcgattcatga
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