Capsella rubella (pink shepherd's-purse): 17899499
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Entry
17899499 CDS
T02984
Name
(RefSeq) 3-ketoacyl-CoA synthase 5
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00062
Fatty acid elongation
crb01100
Metabolic pathways
crb01110
Biosynthesis of secondary metabolites
crb04626
Plant-pathogen interaction
Module
crb_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
17899499
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
17899499
Enzymes [BR:
crb01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
17899499
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Paralog
GFIT
Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
Chal_sti_synt_N
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
17899499
NCBI-ProteinID:
XP_006307339
UniProt:
R0GWA4
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MSDLSSSVKLKYVKLGYQYLVNHFLTLLMIPIIATVGIELLRMGPQEILSVLSSLHFELL
HILCSSFLIIFVSTVYFMSKPRTVYLVDYSCYKPPVTCRVPFSSFMEHSRLILKDNPKSV
EFQMRILERSGLGEETCLPPAIHYIPPAPTMESARNEAQMVIFTAMEDLFKKTGLKPKDI
DILIVNCSLFSPTPSLSAMIINKYKLRSNIKSFNLSGMGCSAGLISVDVARDLLQVHPNS
NAVIISTEIITPNYYKGNERAMLLPNCLFRMGGAAVLLSNRRSDRWRAKYKLCHLVRTHQ
GADDKSYYCVMEEEDKEGNVGINLSKDLMTIAGEALKANITTIGPLVLPASEQLLFLSSL
IGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDELQKSLQLSGEHVEASRMTLHRFGN
TSSSSLWYELSYIEAQGRMKRSDRVWQIAFGSGFKCNSAVWKCNRTIKTPTDGPWSDCID
RYPVFIPEVVKL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatctctcgagctccgtgaagcttaaatatgtgaaactcggttaccaataccta
gtcaaccacttcctcactctccttatgattccaatcatagcaaccgtcggcatcgagctt
ctccgaatgggtccccaagagattctcagtgtcttgagctcactccacttcgagctcctt
catatcctttgttcctctttcctcatcatcttcgtctcaaccgtttacttcatgtccaag
ccacgcaccgtctaccttgtagactactcttgctacaagcctcccgtcacgtgccgtgtc
ccgttctcttcgttcatggagcactctcgcctcatccttaaagacaatcccaagagcgtt
gagttccaaatgagaatcctcgagcgatcaggtctaggtgaagagacttgtctccctcca
gctattcattacatccctccagctccaaccatggaatccgcaagaaacgaagcccaaatg
gttatcttcaccgccatggaagatctcttcaagaaaacaggccttaaacctaaagacatc
gacatcctcattgttaactgctctctgttctcaccaacgccttctctctccgccatgatt
attaacaaatacaagctcagaagtaacattaaaagctttaacctttccgggatgggatgc
agtgccggcctcatctccgtcgatgtagcacgtgacttgttacaagtccatcctaactcc
aacgcagtcataattagcactgagatcattactcctaactactacaagggtaatgagaga
gccatgttgctcccaaattgcctcttccgcatgggtggcgccgccgttctcctctctaac
cgcagatccgacaggtggcgagctaagtacaagctctgtcaccttgtcaggacccaccag
ggtgctgatgataagtcgtactactgtgttatggaggaggaagacaaggaaggtaacgtg
gggatcaacttgtctaaagatctcatgaccatcgccggagaagccttgaaagctaacatc
actaccataggtcctctggttctaccggcatcggagcagcttctcttcctatcatcgctt
atcggacgtaagatcttcaatccaaagtggaagccatacataccagacttcaagcaggcc
ttcgagcatttctgcatccacgcaggaggaagagcagtgatcgacgagctgcaaaagagt
ctgcagctgtcaggagaacacgtggaagcttcgagaatgacactacataggtttggtaac
acgtcgtcgtcttcgttgtggtatgagctaagctacatagaggctcaagggaggatgaag
agaagcgatagggtttggcagatagcgtttggaagtggattcaagtgtaactccgctgtc
tggaaatgtaaccgtacgatcaagacaccaacggatggaccttggtcggactgcatcgac
cgataccctgtctttatccctgaagttgtcaaactatga
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