Capsella rubella (pink shepherd's-purse): 17899596
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Entry
17899596 CDS
T02984
Name
(RefSeq) exocyst complex component SEC5B isoform X1
KO
K17637
exocyst complex component 2
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17899596
Membrane trafficking [BR:
crb04131
]
Exocytosis
Tethering complex
Exocyst complex
17899596
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec5
Dor1
VPS51_Exo84_N
DUF6469
Motif
Other DBs
NCBI-GeneID:
17899596
NCBI-ProteinID:
XP_006303143
UniProt:
R0GJX6
LinkDB
All DBs
Position
Unknown
AA seq
1089 aa
AA seq
DB search
MSSDSDDFDEDELLQMALKEQSQRDLTYQKPPSATARKPVANLVQQPRKQKTAAAPPSRK
SIGGTKPSRKPSMDDDDESEVELLSISSGDDDVGNDRRRDGGGGRGRGGSGKERGRARKE
DDGAWDGVEPDCWKRVNEAELARRVRDMRESRTAAPVTQKLERKVSGGKNAVLTSLQSFP
RGMECIDPLKLGIIDNKTLRLITESSESLSKAEKVDNALREKLVYISDHFDPKLFLSRIH
QETSAADLESGALALKSDLKGRNLQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEDDPDG
SGTTHLFNCMKSVTSRANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSIIRSSISK
GEYDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMQEFKCTLYRSMEDPKIDLTSLENT
VRLLLELEPESDPVWHYLNVQNHRIHGLLEKCTFDHEARMEILRNQVHERALADAKWRQI
QQNGVQLSDDTSSIDDNQVQVDLPSVESGGKENDALRGRYIKRLTAVIIYHLPAFWKTAL
SIFSGKFAKSSQVNDTSASKAEEKVEEARYSSHSLEEVAGMIRNTISVYEEKVQSTFHDF
DESYILQPYMSDTIKEVSKACQAFEAKESAPHSAVIALRKVKVEITKIYIQRLCSWMRAS
TEGISKEETWIPVSILERNRSPYSISYLPLAFRSVIISGMEQINLMILSLKGETATSEDM
IAHIEEILISVRLAFLNCFLDFAAHLEQIGADLSQGTSKRESWQNGYSNDHQEEPSINAP
ESVVDPHRQLLMILSNIGYCKDELASELYNKYKYTWLQSRGADDDNSDLQDLTMSFSGLG
EKVLEHYTFAKANLIRTAATNYLLDSGIQWGAAPPVKGIRDNAVELLHTLVAVHAEVFAG
AKPLLDKILGTLVEGLIDTFLSLLEENRSDDLSSIDANGFCQLMLELEYFETILNPYLTV
DATESLKSLQGAVLEKATESISEKVENNPGGHQRKPTRGSEDAISEDKQSSVSPDDLLAL
AQQCTSGMLQLELEKTRLNSACFVETIPLDPMPPVAKASYSRTSRDSPSRNYREPQSMGS
PVQARPRQR
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcgacagcgatgactttgacgaagatgagcttcttcaaatggcgttgaaggag
caatctcagagagatcttacatatcagaagcctccttccgccactgctcgtaagcctgtc
gcgaatttagtgcagcagccacggaaacagaagacggcagcagctcctccgtcgaggaag
tctattggaggtacgaagccgtcgaggaagccatcgatggatgatgatgatgaatcggag
gtggaattgcttagcatttcgagcggagatgacgatgtggggaatgatcggagaagagat
ggtggtggaggtagaggaagaggtggaagtggtaaggagagaggaagagcgcggaaggaa
gatgatggagcttgggacggagtggagcctgattgctggaaacgagtgaatgaagctgag
ctcgcccgcagggttcgtgatatgcgggagtcgagaacagcggcacccgtgactcaaaag
cttgagcggaaggtatctggaggcaagaatgcggttctcaccagtttgcaatcatttcct
cgtggcatggaatgcattgatccactaaaattagggataatagataacaagactctgaga
ttaatcactgagtcatcagaaagtctttctaaagctgagaaagtggataatgcacttcgg
gaaaagttggtgtacatttctgaccatttcgatcccaagctatttctttctcgcattcac
caagagacaagtgcagcggacttggaatctggtgcccttgctctgaaaagtgacttaaag
ggtcgtaatttacaaaggaaacaactggtgaaagataattttgactgctttgtctcctgt
aaaacaacaattgatgatattgaatcaaaactgaaacggatcgaagatgaccctgacgga
tcgggaactactcatttgtttaattgtatgaagagtgtgacatcacgggctaatcgtgct
tttgagccactttttgagagacaggcccaagctgagaagatcaggtctgtacaaggaatg
cttcagagattccgtacactcttcaacttacctagtataatacgtagcagtattagcaaa
ggagagtatgatttggctgttcgagaatacaaaaaggcgaagtctattgctctcccttct
catgtcaatatactcaagcgtgtactagaggaggttgagaaagtaatgcaggagtttaaa
tgcaccctttacaggtctatggaagatccaaaaatagacttaacgagtttggaaaacact
gtgaggcttttgctggagctggagcccgaatcagatcctgtttggcattacttaaatgtt
cagaaccatagaatccatggactgcttgaaaagtgtacatttgatcatgaagcaaggatg
gaaattttgcgcaaccaggtgcatgagagagctctcgctgacgcgaagtggcgacaaatt
caacaaaatggcgttcaactttcagatgacacgtcttctatagatgataatcaagttcaa
gttgacctaccatcagtagagtcgggagggaaagaaaatgatgctttgaggggaagatac
atcaaaagattgactgctgtaatcatatatcatctccctgcgttttggaaaacagctctt
tctattttcagtgggaaatttgccaagtcttcccaagttaatgacacatcagccagtaaa
gctgaggagaaggtggaagaggcgaggtattcaagtcattctttggaagaagttgctggg
atgatacgcaataccatatctgtttatgaagaaaaggtgcaaagcacatttcatgatttt
gacgaatcatacattctccagccatatatgagtgataccatcaaagaagtatcaaaagca
tgccaagcttttgaagccaaagagtcagctccccatagtgctgtcattgcactcagaaaa
gtcaaagtggaaatcactaaaatatacatccaaaggctttgctcttggatgagggcatct
acagaaggaatatcaaaggaagagacgtggatcccagtttctattcttgaaaggaataga
tctccatattccatctcttacctgccccttgcattccgttcagttatcatctctgggatg
gaacaaattaatctgatgattctatctttaaaaggtgaaactgctacatcagaagatatg
attgcccatattgaggaaatcctgatatctgttagacttgcctttttgaactgctttctg
gattttgctgctcacttagagcaaattggtgctgacctttctcaaggcacctcaaagaga
gagagttggcaaaatggatattccaacgaccaccaggaagaaccatcaatcaatgctcct
gaaagtgtcgttgatcctcataggcagttgctgatgatcttaagtaatataggttattgc
aaagacgaactcgcctctgagctttacaacaagtacaaatatacttggttacagtcgagg
ggggccgatgatgacaacagtgaccttcaagatctaacaatgtctttctctggtcttgga
gagaaggtcctcgaacattacacgtttgctaaggcaaacttgatcagaacagctgcaaca
aattatttgctggactctggtattcagtggggtgcggcgcctccggtaaaaggaatacga
gataatgctgttgagctgttacacactttggttgctgtccatgcagaggtatttgcgggt
gccaaaccacttcttgacaaaattcttggcactttggtcgaaggtctgattgatactttt
ctcagtcttctggaagaaaacagatctgacgacctgagctcaatagatgcaaatggtttc
tgccaattgatgcttgagcttgaatactttgaaactatactgaacccatatttgacggtt
gatgcaaccgagtctctaaagtctctgcaaggagctgtgttggagaaagctacagagagt
ataagtgagaaagttgagaacaatccaggagggcatcaacggaaaccaacacgtggtagt
gaagatgcaatttctgaagacaaacaatcatccgtatccccggatgatctccttgctctt
gcacagcaatgtacaagcgggatgcttcaactagagttagagaaaacccgtttgaacagt
gcatgtttcgttgagacaattccgttggatccaatgccaccagtagccaaagcttcttac
tctagaacatctagggattctccgagcagaaactatagagagccacaatcaatgggttcg
ccggttcaagccaggccaagacaaagataa
DBGET
integrated database retrieval system
