Capsella rubella (pink shepherd's-purse): 17899686
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Entry
17899686 CDS
T02984
Name
(RefSeq) long chain acyl-CoA synthetase 2
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00061
Fatty acid biosynthesis
crb00071
Fatty acid degradation
crb01100
Metabolic pathways
crb01212
Fatty acid metabolism
crb04146
Peroxisome
Module
crb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
17899686
00071 Fatty acid degradation
17899686
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
17899686
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
crb01004
]
17899686
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crb04147
]
17899686
Enzymes [BR:
crb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
17899686
Lipid biosynthesis proteins [BR:
crb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
17899686
Exosome [BR:
crb04147
]
Exosomal proteins
Exosomal proteins of breast milk
17899686
Exosomal proteins of breast cancer cells
17899686
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
17899686
NCBI-ProteinID:
XP_023645294
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MASAADHVLVVEKGRPATADSPSAGPVYRCKYAKDGLLDLPTDIDSPWQFFSEAVKKYPN
EQMLGRRLTTDSKVGPYTWITYKEAHDAAIRIGSAIRSQGVDPGHCCGIYGSNCPEWIIA
MEACMSQGVTYVPLYDTLGVNAVEFIINHAEVSLVFVQEKTVSSILSCQKGCSSNLKTIV
SFGEVSSTQKEEAKNQCVSLFTWNEFLLMGNSDETKLPPKQKTDICTIMYTSGTTGEPKG
VILNNAAISVQVLSIDKMLEVTDRSCDTTDVFFSYLPLAHVYDQVMEIYFLSRGSSVGYW
RGDIRFLMDDVQALKPTVFCGVPRVYDKLYAGIMQKISAGGLIRKKIFDFAYNYKLGNMK
KGFSQEEASPRLDRLMFDKLKEALGGRAHMLLSGAAPLPRHVEEFLRIIPASNLSQGYGL
TESCGGSFTTLAGVFSMVGTVGVPMPTVEARLESVPEMGYDAFSADVPRGEICLRGTSMF
SGYHKRQDLTDQVLIDGWFHTGDIGEWQEDGSMKIIDRKKNIFKLSQGEYVAVENLENTY
SRCPLIAQIWIYGNSFESFLVGVVVPDKKAIEDWAKLNNQFPNDFESLCQNLKAQKYFLD
ELNSTAKQYQLKGFEMLKAIHLEPNPFDIERDLITPTFKLKRPQLLQHYKGIVDQLYSEA
KRSMA
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagcggctgatcatgttttggtggtggaaaaaggacggccagccacggccgat
agcccatcggctggaccggtgtatcgatgtaaatacgctaaggatggcctcctagatctc
cctactgatattgattctccttggcagttctttagtgaggctgtgaagaaatatccgaat
gagcaaatgttaggccgacgcttaacgactgattctaaggttggtccatatacatggatc
acatataaggaagcccacgatgctgcaattcggattggatcagcaatcagaagccaaggc
gttgatccgggacattgctgtggaatctacggatccaactgtccagaatggattattgca
atggaggcctgcatgagccaaggggtaacatatgtgcctctatacgatactttaggcgta
aacgcagttgaatttatcatcaaccatgctgaggtttcgctagtatttgttcaagagaag
acagtttcatccatcttatcgtgccaaaagggatgttcttcgaatttgaagactattgtg
agcttcggggaagtctcgagtacacaaaaggaagaagctaagaaccaatgtgtttcttta
tttacatggaatgagttcttactaatgggaaactcagatgagaccaagctgccacctaag
caaaagacagacatatgcacaataatgtacacaagcgggacgacaggagaacccaaaggt
gtaatcttaaacaatgcagcaatctctgtccaagttttgtccattgacaaaatgcttgaa
gtcaccgatcgttcgtgtgacacgaccgatgtgttcttctcgtacttgccattagcacat
gtctatgatcaagtcatggagatttactttttatctagaggctcctctgttggatactgg
cgtggcgacatacggttcttgatggatgacgttcaagctctaaaaccaactgtgttttgc
ggtgttccacgagtttacgacaaactttatgccggtataatgcaaaaaatatcagctggt
ggcttgatacgcaagaaaatcttcgattttgcttataactataaattggggaatatgaaa
aaaggattctcccaagaggaagcttctcctcgtctagacagacttatgttcgataagcta
aaagaagcattaggaggaagagctcatatgttgttatcaggtgcagcgcctctaccccgt
catgttgaagagttcttgagaatcattcctgcctctaacctttctcaaggttatggattg
actgagagttgtggaggaagcttcacgaccttagcaggagtattttctatggtgggaaca
gttggtgtgccaatgcctacggtggaggcaaggttagagtccgtaccggagatgggttat
gacgccttttccgcagatgtgccaagaggagagatttgtcttagaggaacttcaatgttt
tctggttaccataaaagacaagatctaactgatcaagtcctaatcgatggatggtttcac
acaggagatattggggaatggcaagaagatggatcaatgaagatcatagataggaagaag
aacatcttcaagttgtctcaaggtgaatatgttgctgtcgaaaacctcgaaaacacttac
tcaagatgtcccctcattgctcagatatggatctatggaaacagctttgagtcgtttttg
gtaggtgtggttgtacctgataaaaaggctattgaagattgggctaaacttaacaaccaa
tttcccaatgattttgaatccttatgtcaaaatctcaaagctcaaaaatacttcttggat
gagcttaactctaccgcaaagcaataccaactgaaaggatttgaaatgttaaaagcaatt
catttggaaccaaacccttttgatattgaaagagatcttattacaccaactttcaagttg
aaaaggccacagcttctccaacattacaagggcatagttgaccaactttattcagaagca
aagaggtccatggcatag
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