Capsella rubella (pink shepherd's-purse): 17899699
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Entry
17899699 CDS
T02984
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37b
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
5.6.1.10
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03060
Protein export
crb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
17899699
04141 Protein processing in endoplasmic reticulum
17899699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
crb03110
]
17899699
04131 Membrane trafficking [BR:
crb04131
]
17899699
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crb04147
]
17899699
Enzymes [BR:
crb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.10 non-chaperonin molecular chaperone ATPase
17899699
Chaperones and folding catalysts [BR:
crb03110
]
Heat shock proteins
HSP70 / DNAK
17899699
Membrane trafficking [BR:
crb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
17899699
Autophagy
ER-phagy
ER stress-related proteins
17899699
Exosome [BR:
crb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
17899699
Exosomal proteins of other body fluids (saliva and urine)
17899699
Exosomal proteins of colorectal cancer cells
17899699
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Radial_spoke_3
FGGY_C
FtsA
ParM_N
Motif
Other DBs
NCBI-GeneID:
17899699
NCBI-ProteinID:
XP_006306953
UniProt:
R0GVL8
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MIFIKEKTTNMTNRALVCLVFLMTALMSSVAIEGEDQKLGTVIGIDLGTTYSCVGVYHNK
HVEIIANDQGNRITPSWVAFTDTERLIGEAAKNQAAKNPERTIFDPKRLIGRKFDDPDVQ
RDIKFLPYKVVNKDGKPYIQVKVKGEVKVFSPEEISAMILTKMKETAEAFLGKNIKDAVI
TVPAYFNDAQRQATKDAGAIAGLNVVRIINEPTGAAIAYGLDKKGGESNILVYDLGGGTF
DVSILTIDNGVFEVLSTSGDTHLGGEDFDHRVMDYFIKLVKKKYNKDISKDHKALGKLRR
ECERAKRALSNQHQVRVEIESLFDGVDFSEPLTKARFEELNMDLFKKTLEPVKKALKDAG
LKKSDIDEIVLVGGSTRIPKVQQLLKDFFDGKEPNKGTNPDEAVAYGAAVQGGVLSGEGG
EETQNILLLDVAPLSLGIETIGGVMTNIIPRNTAIPTTKSQVFTTYQDQQTTVTIKVYEG
ERSMTKDNRELGNFDLTGILPAPRGVPQIMVTFVVDANGILQVKAEDKVAKTSQSITITN
DKGRLTEEEIEKMIREAEEFAEEDRIVKEKIDARNKLETYVYNMKSTMADKEKLAEKISD
EDKEKMEEVLKEVLDWLEENVNAEKEDYDEKMKEVESVCNPVIKSVYEKTSGDSEDDGGD
DHDEL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgatttttatcaaggaaaagacaacgaatatgacgaacagagctctcgtttgtttggtt
tttcttatgacagctttgatgtcaagtgtggcaatagaaggcgaagatcagaagctcggg
acggtgatagggatcgatctagggactacatattcatgtgttggtgtttatcataacaaa
cacgttgaaatcatagcaaacgatcaggggaacagaattacaccatcttgggttgcattc
actgatactgaacgtctcattggagaagctgctaagaatcaagcggccaagaaccctgag
cggaccatcttcgacccaaaacgtctgattggaagaaaatttgatgatcctgatgtacaa
agggatatcaaattcttgccatacaaggtcgtgaacaaagatggaaagccttacattcag
gtgaaggttaaaggtgaagtgaaagtgtttagccctgaggaaattagtgctatgatccta
acaaagatgaaggagacagctgaagctttcttgggaaagaatatcaaagatgctgtcatc
acggttccagcgtattttaatgatgcgcagaggcaagccacaaaggatgctggagcaatt
gcaggacttaacgtggttcgtataatcaatgagccaacaggtgcagccatagcttatggt
ttagacaaaaaaggtggggagtcaaacattctcgtatatgatcttggtggaggaacattc
gatgttagcatccttactatagacaatggagtctttgaagtcctatccacaagtggagac
actcacctcggtggagaagattttgaccacagagtgatggattacttcatcaaactggtc
aagaagaagtataacaaagacataagcaaagatcacaaagcccttgggaaacttaggcgt
gaatgtgagcgtgcgaaacgagctttgagcaaccagcaccaagtccgtgttgaaattgag
tcactctttgatggagtcgatttctctgagcctctgacaaaagcgagattcgaggaacta
aacatggatttattcaagaagaccctggagccagtgaagaaggctcttaaagacgcgggg
ttgaagaaatctgatatcgacgagattgttcttgttggaggaagcactcgaatcccaaaa
gtccagcagcttttaaaagatttctttgacggcaaggaacctaacaaagggactaaccct
gatgaggctgtggcctatggcgccgctgtccaaggtggagtgttaagtggtgaaggtgga
gaagaaacacaaaatatcctgctgcttgatgttgcgcctttgagcctcggtattgaaact
atcggaggcgtgatgacaaatattattccgaggaacacggcaatcccaacgacgaagtct
caggtattcactacttaccaagatcagcaaactactgtgaccatcaaagtctatgaaggc
gagagaagcatgactaaagataaccgcgagctcggaaatttcgatctcaccggcattctt
cctgcacccaggggagtgccacagattatggtgacttttgtagtggacgcaaatggaatt
ctgcaggtgaaggccgaagacaaggttgcaaagacgtcacagtcgattacaataacgaac
gataaaggtcgtttgacagaagaagagattgagaagatgataagagaagcagaggagttt
gcagaggaagataggattgtgaaggagaagattgatgcaaggaacaagcttgaaacgtat
gtgtacaacatgaagagtacaatggcggataaggagaagcttgccgagaagataagtgac
gaagataaagagaagatggaagaggttttgaaagaggtgttggactggttagaggagaat
gtgaatgcagagaaggaagattacgatgagaaaatgaaggaggtggagtcggtctgtaat
ccggttattaagtcggtttacgagaaaaccagtggagatagtgaagacgacggtggagat
gatcatgatgagttatag
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