Capsella rubella (pink shepherd's-purse): 17899739
Help
Entry
17899739 CDS
T02984
Name
(RefSeq) paired amphipathic helix protein Sin3-like 3
KO
K11644
paired amphipathic helix protein Sin3a
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crb03036
]
17899739
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
17899739
REST complex
17899739
Heterochromatin formation proteins
Other heterochromatin formation proteins
17899739
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
17899739
NCBI-ProteinID:
XP_006304840
UniProt:
R0IL27
LinkDB
All DBs
Position
Unknown
AA seq
1330 aa
AA seq
DB search
MVGGGSAQKLTTNDALAYLKAVKDKFQDQRDKYDEFLEVMKNFKSQRVDTAGVITRVKEL
FKGHQELILGFNTFLPKGFEITLQPEDGQPPLKKRVEFEEAISFVNKIKARFQGDDRVYK
SFLDILNLYRKDSKSITEVYQEVAILFRDHADLLVEFTHFLPDTSATPSIPSVKTPVRDR
GISLPDKKDRIITPHDYSTEHVDLDRDRPVKKENKEHVRGYHKENEHRDARDFEPDSKKV
QFLNSKQKVYIRGDDSAENSNQVRDGKKISGAVPSSSTYDEKGAMKSYSQELTIVDRVKD
KLNASEYQEFLRCLNLFSKEIISRPELQSLVGNLIGVYPDLMDSFIEFLMQCEKNEGLLS
GILTKKSLWSEGKYPQPSLDNDRDQEHKSDEGFRDKDHDKERLEKAAASQKWAKPISELD
LSNCEQCTPSYRLLPKNYPISIASQKTELGKLVLNDHWVSVTSGSEDYSFSHMRKNQYEE
SLFKCEDDRFELDMLLESANSTAKHVEELLAKINSNELKINSPIRVEDHLTALNIRCIER
LYGDHGLDVMDVLKKNVSLALPVILTRLKQKQEEWVRCRSDFDKVWADIYAKNYYKSLDH
RSFYFKQQDSKNLSMKALLVEIKETTEKKREDDSLLALAAGNRLSISPNLEFDYPDSDLH
EDLYQLIKYSCAEMCSTEQLDKVMKIWTTFMEQIFGVPSRPQGAEDREDVVNSTNQNVKS
GSASAGESEGSPHKCTNVADPRRSKASRKINERNQLGQSSNPDRNCTAGRTSDTLCETAQ
YETMEKNVVTPDERPESKHAVSIERVHDSTAFSVGGLSDQSNGGNGHGSNNLKPSGMTRG
IELELKVNDGNGAKVEVGNKKVLTNGISVEITSNQELAGKSKVEREEGELSPNGDFEEDN
FADYAKSGLEATSKANDNAGNNLNREKIREDEPCCLETGAENDAEGDENAARSSEDSRNA
YENGDVSGTESGGGEEPEDDMDPNNKGESEGEDEGMADAQDTEEDGSPLPFSARFLLHVK
PLAKYVPSALALHDKDKEIPKNSQVFYGNDSFYVLFRLHRILYERILSAKVNSASPEGKW
RTSDTENPTDSYARFMTALYNLLDGTSENAKFEDDCGAIIGTKSYVLFTLDKLIHKFIKH
LQGVAADEMDNKLLQLYAYEKSRKPETIFDAVYYDNARVLLPDENIYRIECKLSTPAKLS
IQLMCNGLDKPDVTSVTIDPTFAAYLHSDFLSIQSNARENRRIYLNRNKRKIGGEDEQLH
TTDGVKIKNGLECKIACSSSKVSYVLETEDLLVRVKKRRKTLSQNQDSISNCCLIRQRRL
QRYQRLVTSL
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggttggaggaggaagtgcacagaagcttactacaaatgatgcgcttgcataccttaaa
gccgtgaaggataaatttcaagatcaacgtgacaaatatgacgagtttctcgaggtcatg
aagaattttaaatctcaaagagttgatacagctggtgtcataacaagggttaaagaactt
tttaaagggcaccaagagttgattttgggtttcaataccttcttgccaaaaggttttgag
atcacacttcaacccgaagatgggcaacctccacttaagaaacgcgttgagtttgaggaa
gcaattagttttgtcaacaagattaaggcaaggtttcagggagatgatcgtgtatacaaa
tcatttttagacattttaaacttgtacagaaaggatagcaagtccatcactgaggtctat
caggaggttgcgatcctatttcgggatcatgcagatttacttgtggagtttactcatttt
ctacctgatacttctgcaacaccctctattccttctgttaaaactccagttcgtgacaga
gggatttctcttcctgataagaaggaccggatcattactccacatgactatagtactgaa
catgttgacctggatcgggatagacctgtgaagaaagaaaataaagaacacgtgagaggt
tatcacaaagaaaatgagcatagggatgccagagatttcgaacctgatagcaaaaaagtg
cagtttctgaacagcaagcaaaaagtatatattagaggtgatgattctgctgaaaactcc
aatcaagtcagggacggaaagaaaatttctggggcggttcctagttcatctacttatgat
gaaaaaggtgccatgaaaagttatagtcaagagttaactattgtcgatagagtaaaggac
aagctgaatgcctcagagtaccaggagttcttacgttgtcttaatctcttttcaaaagaa
ataatcagccgacctgaattgcaatctttggtaggaaatttaattggagtatatcctgac
ctcatggattcctttatagagtttttgatgcaatgtgaaaagaatgaaggactgctttct
ggtattctgactaagaagtccttgtggagtgagggcaaatatcctcaaccttcactggac
aatgatagagaccaagaacataagagcgatgaagggtttagagacaaagatcatgataag
gagaggcttgaaaaagcggcagcaagtcagaaatgggcaaagccaatcagtgaactggat
ctctcgaattgtgaacaatgcactcctagttataggttacttccaaaaaattacccaatt
tccattgcaagccagaagacagagttaggtaaactggttcttaacgatcactgggtctct
gtcacatccggaagtgaagactattcatttagccacatgcgcaagaaccagtatgaagag
agcctcttcaaatgtgaggatgacaggtttgagctagacatgctattagaatctgcaaat
tcaactgcaaagcatgtagaagaattattagcaaagatcaacagtaatgaattgaaaatc
aacagccccatccgtgtcgaggatcacctcacagctctaaatataagatgcatagaacgg
ctatatggtgatcacgggctagatgtgatggatgtgttaaagaagaacgtgtctcttgct
ttacctgttatcctaacacgtttgaaacagaagcaagaagagtgggtaaggtgtcgttct
gatttcgacaaagtctgggctgacatatatgctaagaactactacaaatcgcttgatcat
cgaagtttctacttcaaacagcaggattcaaagaatctgagcatgaaagcattgttggta
gagattaaagagactactgaaaagaagcgagaggatgattcacttcttgcacttgcagcc
ggaaatagactatccatttccccaaatttggaatttgattatcctgattctgaccttcat
gaagatctctaccagctgatcaagtattcatgtgcagaaatgtgctctaccgaacagtta
gataaagtaatgaagatttggacaaccttcatggaacagatatttggtgttccttctcgc
cctcaaggtgctgaagaccgagaagacgttgtcaattccacaaaccagaatgtaaaaagt
ggtagtgcaagtgctggagagagtgagggaagtcctcacaaatgcactaatgttgctgac
cctagacgctcgaaggcatctcggaaaattaatgaacgtaatcagttggggcaaagcagt
aatccagataggaattgcacagctggtaggacctcagataccttatgtgagactgctcag
tatgagacaatggagaagaatgtagtgacacctgatgaaaggcctgaaagcaaacacgct
gtttctattgaacgtgtacatgattcaactgctttctctgtgggtggattatcagaccaa
agtaatggaggaaacggacacggcagtaacaatctgaagcctagtggtatgacgcgtgga
atagagttggagttgaaggtgaatgatggaaatggggcaaaagtagaggttggtaacaag
aaagtattgactaatgggatctcggtagaaataacaagtaatcaagagttggctgggaaa
tccaaagttgaaagagaagaaggtgaactttctcctaatggagactttgaggaagataac
tttgcagattatgcaaaaagtggtttggaggctaccagcaaagcgaatgataatgctgga
aataacttaaaccgagagaaaattagagaagatgaaccatgttgtctggagacaggggct
gagaatgatgctgaaggtgacgaaaacgctgcaagatcatcagaggacagcagaaatgca
tatgagaacggtgatgtttctggaacggagtctggtggtggtgaagaaccggaggatgat
atggatcccaataacaagggagaaagtgaaggagaggatgaaggtatggctgatgcacaa
gatactgaagaagatggatctcccttacccttttcagctcgattcctactgcatgtaaag
cccttagcaaagtatgttccgtcagctttagctttgcatgacaaagacaaagagattcca
aagaactcccaagtcttctatgggaatgattcattttacgtgcttttcaggcttcaccgg
atattgtatgagagaatattatcagcaaaagttaactcagcatccccggaaggaaagtgg
aggacctcagataccgaaaatcctaccgattcctatgccagattcatgactgctctctac
aacttacttgatggtacatctgaaaatgccaaatttgaagatgactgtggagccataatc
gggactaagtcttacgttctcttcacattggacaaactgatccataagttcatcaagcat
ctccaaggagtagcagccgatgagatggataacaaacttcttcagctttatgcatatgag
aaatccagaaagcctgaaacgatttttgatgctgtttattacgataatgcccgtgtgctc
ctccccgatgagaatatttaccgtattgaatgtaaactatcaaccccagccaaactctct
attcagcttatgtgcaacggtcttgataagcccgatgtgacatctgtaaccattgacccg
acctttgcagcttatctccacagtgacttcctctctatacaatcgaatgcaagggagaac
cgcagaatctatttaaataggaacaagcgcaaaattggtggtgaagacgaacagctacac
accacagatggagttaagattaaaaatggattggagtgtaagatagcttgcagttcttca
aaggtctcttatgtattggaaacagaagacctattggtgagagttaaaaagagaagaaaa
actttgagccagaaccaggattccatttccaattgttgtttaattaggcaaaggaggtta
caaagataccaaagacttgtgaccagcctgtaa
DBGET
integrated database retrieval system
