Capsella rubella (pink shepherd's-purse): 17899903
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Entry
17899903 CDS
T02984
Name
(RefSeq) sm-like protein LSM1A
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
17899903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17899903
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
17899903
mRNA degradation factors
5'-3' decay
Lsm complex
17899903
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
17899903
NCBI-ProteinID:
XP_006303432
UniProt:
R0IDQ1
LinkDB
All DBs
Position
Unknown
AA seq
128 aa
AA seq
DB search
MSWAAPDDIFFSTSLAAYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEEAYERVIVGNL
YCDIPLGLYIIRGENVVLIGELDVEKEELPAQMIQVSEAEIKRAQKAEKEEMLLKGTMRK
RMEFLDLD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctgctcctgatgatatcttcttctccacttctctagctgcttacttagac
aagaaacttcttgtgctgctccgtgatggtaggaaactgatgggtctacttcgttccttt
gatcaatttgccaatgctgtgttagaagaagcttatgaaagagtcatcgtgggtaatctc
tactgtgatattcccttgggtctttacattatccgtggcgaaaatgttgtcttgattggt
gaactggacgttgaaaaagaagagcttcctgctcaaatgattcaggtttcagaagcagaa
atcaaaagggctcagaaagcagagaaagaagaaatgcttctaaagggtactatgcggaaa
agaatggagttccttgatctcgattag
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