Capsella rubella (pink shepherd's-purse): 17899952
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Entry
17899952 CDS
T02984
Name
(RefSeq) protein TSS
KO
K03255
protein TIF31
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
crb03012
]
17899952
Translation factors [BR:
crb03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
17899952
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
eIF3_p135
TPR_10
TPR_NPHP3
TPR_2
CLU_N
PAM2
TPR_MalT
TPR_8
TPR_9
CLU
TPR_1
Motif
Other DBs
NCBI-GeneID:
17899952
NCBI-ProteinID:
XP_023645162
LinkDB
All DBs
Position
Unknown
AA seq
1583 aa
AA seq
DB search
MAPRSSKGKSNSRGRGGDHKKKREEKVLLAPSLVEITVTTPYETQVILKGVSTDRIIDVR
RLLASHVETCHFTNYSLSHKVKGHKLSDNIQVVSLKPCFLRMIPEEYLEESQAWDQVRRV
VDIVACTTRFSSASAKSPPNKPIVAGNNGIQAPASPEGLDMVAIHPTPKLSQFYDFFSIS
HLSPPILHLKKVDGEEAGERRDRDGYYFGLKVKICNGKVIHVIASVKGFFAVGKHLSHCH
SIVDLLQNVSNAFAKAYESLMTAFTDRNKCGNLPYGLRSNTWLVPPPVSESPSTFSPLPT
EDGHWGGNGGGQGMHGEYDLRPWAADFSVLATLPCKTDEERVIRDKKAFLLHNQFVDTSV
RRAVRAICDVMDTNQHTVGATGIPAASILLEDHVGDLSIIVKRDIASLDAKSEAAFQNEA
FVLSSMELAVRNLLKGITADESVIVHDTPALGTVSVRHCGYTAVVYVEGKTYKAMSDCRD
ILIDDLPEGGANALNLNSLRVQLHRSHSVGSFGENQLTQLDSDDLESYRCIVLELVKINL
AKLEEKRVSSVRPIRWELGSCWVQHLQKKETDVSGKPATNDQIELSVKGLGKQFKVLKSK
SKKSENTSTLKEKEKEKDIRLHGLNGEADLGHKSTDEYFETELKELLSEEAFSRLKETGT
GLHLKSKEELTKMVYGYYDEIALPRLVADFGSLELSPVDGRTMTDFMHIRGLQMRSLGHV
AKLAEKLPHIQSLCIHEMITRAFKHLLRAVIASVNNMAELPVAVAASLNFMLGCRELEGC
DRIPSEEYCLRLQWLQKFLSRKFGWIQKAEFNHLKKNSILRGLCQKVGLELVPRDYDFDS
PNPFKSSDIFGLVPVCKHVLCISSDGRTLLESSKLALDKGKLEDAVNYGTKALVKMIAVC
GPYHRNTACAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFY
YRLQHFELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEKEVGNDHLALRYLHEALK
CNQRMLGADHIQTAASYHAIAVALSFMEAHSLSVQHEQTTLQILTAKLGPDDLRTKDAAA
WLEYFESRAIEQQEAARNGIPKPDASIASKGHLSVSDLLDYISSDPDTKRSVAHRKQRRA
RVLRANHGVAAADATHRVASQNGIATWNDVVEANVIKSRTEVNDPNAVVNEIKTDDVVVH
RLNVDSQIVEDSTVDEGWQEAYSKGRSGNGARRKRQPDLTKKRMSFNRNHNGRQDVQQQN
LSSPLQKTTLRPLSNSSSHRDLKNTGKDVSTNKTKPQLKDSGSAAVASITLASKSLSYKD
VAMAPPGTVLKPMLEKVELQLETTETQIYGISSASAEAESKSDTVMLDLPIEGAELPCEK
QESQESSESVENLTSESEGDLGSCHGQKASGIRRTKLSASAEPYNPGGFVVIDLQSLAAT
TGNYPIMVADPISWAGVTCGIHLPPYYCANHLNGVGMPRSMNPDAPEFVPRRPVQNSSQH
VGGDASVSVDSSSSLKAESGDTARDSAVTEIVYSREEECGANTNETNGSEGFVIVAKKRR
RKNKLRLTNDAAGLYHQPASVCV
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgaggtcgagcaaagggaaatcaaacagcagagggagaggaggagaccataag
aagaagagagaagagaaagtgttgttggcaccgagtcttgttgagatcacagtcacaact
ccgtacgaaactcaggtgatactcaagggagtctctactgacagaatcattgatgtgaga
aggcttttggcatctcacgttgagacttgccatttcaccaactactctctctcccataag
gtgaaagggcacaaattgagtgacaacatccaagttgtttccctcaagccttgtttcctc
cgcatgattcctgaggagtacctggaggaaagccaagcttgggatcaggtgcggagagtc
gtagacatcgtagcatgcaccaccaggttctcctccgcttccgccaaatcaccccccaac
aaacccatcgtcgccggcaacaatggcattcaggcgccggcctcaccggagggcctcgac
atggtcgctatccaccccactcctaaactttctcaattttacgactttttctccatttct
cacctctctcctccgattcttcatttgaagaaagtcgatggtgaagaagctggagagagg
cgtgatcgtgatggttactattttggacttaaggttaagatctgcaatgggaaggttatt
catgtgattgcttcggtgaaagggttcttcgccgttgggaagcatctctcacattgtcat
tccattgttgatttgctccagaatgtcagcaatgcttttgccaaggcatatgaatctcta
atgactgctttcactgaccggaataagtgtggcaacctcccgtatggattacgcagtaat
acatggcttgtacctcctcccgtttctgagtctccttcaactttttctcctttaccaaca
gaggatggacattggggcgggaatggtggaggtcaggggatgcatggtgaatatgatctt
cgaccttgggcagcagatttttctgtattagctacgcttccttgcaagactgacgaggag
agggttattcgagataagaaagctttcttgcttcataatcagtttgtcgatacctcggtg
cgaagagctgttagagccatttgcgacgtgatggatactaatcagcacacagttggggct
actggaatacctgcagcctcgatcctgcttgaggatcatgttggggatttgtctattatt
gtaaaacgtgatatagccagccttgacgcgaagtctgaagctgcatttcaaaatgaagca
tttgttctatcatccatggaacttgctgtaaggaatttgctaaaagggataacagctgat
gagagtgtgattgttcacgatactccggctttaggcacagttagtgtaaggcactgtgga
tatacagcggtggtatatgtcgagggtaaaacgtacaaggcaatgtctgattgccgtgac
attttgattgatgacctgccggagggaggagccaatgctcttaaccttaacagcttaagg
gttcagcttcacagatcccacagtgttggatcattcggagagaaccagctcacacagctt
gattcagatgacttagagtcttataggtgtattgtactggagttagtaaaaattaactta
gcaaagttagaagaaaaaagggtatcttctgtgagacctattaggtgggagctcggttct
tgctgggttcagcatctacaaaagaaagaaacagacgtctctggaaagcctgcaactaat
gatcagattgaactttcagttaaaggcttgggaaaacaatttaaagttctaaagagcaaa
agcaagaaatcagaaaatacaagcaccttgaaggaaaaggaaaaagaaaaagatatcaga
ctacacggattaaacggagaggctgatctagggcataaaagtactgatgagtattttgag
actgaactgaaggaactgctttctgaagaagctttctctcgcctaaaagaaactggaacc
ggtctccatttaaagtcaaaagaagagcttaccaagatggtatatggttactatgatgaa
attgctttgccaaggctggtagcagatttcgggtcactggagctttctccggtcgatggt
cgcacaatgactgacttcatgcatataagaggtctccaaatgcgttcgctaggacatgtg
gctaaacttgctgagaaacttcctcatatacagtctctctgtattcatgagatgattaca
agagctttcaagcatcttcttagggcggttattgcatctgtcaataacatggccgagcta
cctgtggcagtagctgcttcattaaatttcatgcttggctgccgtgaattggaagggtgt
gataggatccccagtgaagagtattgtctcagattacagtggctacagaaatttctctcc
agaaaatttgggtggatacagaaagccgagttcaatcatttgaaaaaaaattccatcctc
cgaggactctgccagaaggttgggttagaactagttccaagagattatgatttcgattct
ccaaatcctttcaagagctctgacatttttggcttggtacctgtgtgcaagcatgtgctg
tgtatttcatctgacggaaggacactcttggagtcatcaaaacttgctcttgacaaagga
aaactagaggatgctgtgaactatggaacaaaggcattagtcaagatgattgctgtttgt
gggccttatcatagaaatactgcttgtgcgtacagccttctcgcagttgtactgtaccac
accggcgattttaaccaggcaacaatatatcagcagaaggctctagatataaatgagaga
gaacttggtctcgaccatcccgacactatgaaaagctatggggatctttctgtattttat
tatcgtcttcaacactttgaattggcactaaaatatgtgaaccgtgcattatttcttctt
cacttcacttgtgggctctctcacccaaatactgctgccacatatatcaatgtggctatg
atggaaaaagaagtagggaatgatcatctagctctaagatacctgcatgaagctctaaag
tgcaatcaaagaatgctaggagcggaccatattcagacagcggcaagctatcatgcaatt
gctgtggctctctctttcatggaagcacattcattgagtgtgcaacatgaacaaactact
cttcagatacttacagcaaaacttggaccagatgacctacgtacaaaggatgctgctgca
tggcttgaatattttgaatcaagagccatagagcagcaggaagcagcccgaaatggaatc
ccaaagcctgatgcttccatcgctagcaaaggccaccttagtgtatcagatcttctggac
tatataagttctgatccagacactaaaagaagtgttgctcacaggaaacagcggcgcgcc
agggtattacgggccaatcatggtgttgcagctgcagatgctacccatagagttgcttca
cagaatggcattgctacatggaatgatgtcgtagaagcgaatgtcattaagagtaggacc
gaagtaaatgatcctaatgcagttgttaatgagatcaaaacagatgatgtcgtagtacat
agactaaatgtagacagccaaattgtggaagattcaactgtagatgagggctggcaagag
gcatactcaaaggggagatccggaaatggtgcgagaaggaaaaggcagcctgatcttacg
aaaaagagaatgtcgtttaatagaaatcataatgggagacaagatgttcagcaacagaac
ttatcttctcccttgcagaaaacaactctaagacccctctctaattcatcatcccacagg
gatctgaaaaacacagggaaagatgtcagtacaaataaaactaagccacagttaaaggat
tctggttctgctgctgtggccagtattactttggcttcaaagtctctctcatacaaagat
gttgctatggcaccaccaggtacagttctgaagccaatgttagagaaagtagaattgcaa
ttggagaccactgaaactcagatatacgggatttcaagtgcgtcagctgaagcagaaagc
aaatctgacactgtaatgttggatttaccaatcgaaggcgcagagcttccctgtgaaaaa
caggaatcacaagaaagtagtgaatcagtggaaaatttaacgtcagagtctgaaggagat
ctggggtcctgtcatgggcaaaaggcttctggtataagaaggacaaagctatcagcctcc
gcagagccttacaatcctggaggtttcgtggttattgatctgcaaagtttagcagcaaca
acaggcaactacccgattatggtagcagaccctatttcctgggctggagttacatgtggt
attcacctaccaccatattactgtgctaatcacttaaatggagttgggatgccaagaagc
atgaatccagatgcaccagagtttgttccgaggagacccgtgcagaatagctctcaacat
gtaggtggagatgcgagtgtatcagttgattccagcagttccctaaaggccgagtcagga
gataccgcaagggatagtgctgtgactgagatagtatatagtagagaagaggagtgtgga
gcaaacacaaatgagacaaatggaagtgaagggtttgtgattgtggcaaagaaaaggagg
aggaagaacaagctgagacttacaaacgatgcagctgggttgtaccatcaaccggcgtca
gtttgtgtctga
DBGET
integrated database retrieval system
