Capsella rubella (pink shepherd's-purse): 17900221
Help
Entry
17900221 CDS
T02984
Name
(RefSeq) carbamoyl-phosphate synthase large chain, chloroplastic
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00220
Arginine biosynthesis
crb00240
Pyrimidine metabolism
crb00250
Alanine, aspartate and glutamate metabolism
crb01100
Metabolic pathways
crb01110
Biosynthesis of secondary metabolites
crb01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
17900221
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
17900221
00220 Arginine biosynthesis
17900221
Enzymes [BR:
crb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
17900221
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_4
ATPgrasp_Ter
ATP-grasp_5
Epimerase
Motif
Other DBs
NCBI-GeneID:
17900221
NCBI-ProteinID:
XP_006306611
UniProt:
R0IAT9
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
MSNHCLELSSNIFASSKSHPRFSPSKLSNSTFFSRSANNYRAKSKLGSSSSSFSTFLPCL
NRKASVTRVLKPVSELADTTTKAFSPEIVGKRTDLKKIMILGAGPIVIGQACEFDYSGTQ
ACKALREEGYDVILINSNPATIMTDPETANRTYIAPMTPELVEQVIEKERPDALLPTMGG
QTALNLAVALAESGALERYGVELIGAKLGAIKKAEDRDLFKQAMKNIGLKTPPSGIGNTL
DECFDIAGRIGEFPLIIRPAFTLGGTGGGIAYNKEEFESICKAGLAASVTSQVLVEKSLL
GWKEYELEVMRDLADNVVIICSIENIDPMGVHTGDSITVAPAQTLTDREYQRLRDYSIAI
IREIGVECGGSNVQFAVNPVDGEVMIIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYT
LDQIPNDITRKTPASFEPSIDYVVTKIPRFAFEKFPGSQPLLTTQMKSVGESMALGRTFQ
ESFQKALRSLESGFSGWGCAKIKELDWDWDQLKYSLRVPNPDRIHAIYAAMKKGMKIDEI
YELSMVDKWFLTQLKELVDVEQYLMCGTLSEITKEDLYEVKKRGFSDKQIAYATKTTEEE
VRTKRISLGVVPSYKRVDTCAAEFEAHTPYMYSSYDFECESAPNSKKKVLILGGGPNRIG
QGIEFDYCCCHTSFALQDAGYETIMLNSNPETVSTDYDTSDRLYFEPLTIEDVLNVIDLE
KPDGIIVQFGGQTPLKLALPIKRYLDKHMPMSLSGEGPVRIWGTSPDSIDAAEDRERFNA
ILDELKIEQPKGGIAKSEADALAIAKEVGYPVVVRPSYVLGGRAMEIVYDDSRLITYLEN
AVEVDPERPVLVDKYLSDAIEIDVDTLTDSYGNVVIGGIMEHIEQAGVHSGDSACMLPTQ
TIPSSCLQTIRSWTTKLAKKLNVCGLMNCQYAITTSGDVFLLEANPRASRTVPFVSKAIG
HPLAKYAALVMSGKSLKDINFEKEVIPKHISVKEAVFPFEKFQGCDVILGPEMRSTGEVM
SISSEFSSAFAMAQIAAGQKLPLTGTVFLSLNDMTKSHLEKIAVSFLELGFKIVATSGTA
HFLDLKGIAVEKVLKLHEGRPHAADMVANGQIQLMLITSSGDALDQKDGRELRQMALAYK
VPVITTVAGALATAEGIKSLKSSAIKMTALQDFFEVKDVSSLPV
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaccattgcttagaactctcttctaacattttcgcttcttcaaaatctcatcct
cgcttctctccttccaagctctccaattccaccttcttctctcgctctgccaacaattac
agagctaaatccaagcttggctcttcttcttcttccttctccacttttctcccatgtctc
aaccgcaaagcctccgttactcgtgttctcaaacccgtctcagagctcgccgacaccact
accaaggccttttctccggagatcgtcgggaaaaggaccgatctgaagaagattatgatt
ctcggtgctggtccgattgtgattggccaagcttgcgagtttgattactctggaactcaa
gcttgtaaagcccttagggaagagggttacgatgtcattctcatcaattccaatccggct
actatcatgactgacccggagactgctaatcggacctatattgctcccatgactcctgag
ctcgtcgagcaggttattgagaaagagaggcctgacgctttgttgcctaccatgggtggc
caaaccgcactgaaccttgccgttgctcttgctgagagtggtgctctcgagagatacggt
gttgaattgattggggctaagcttggtgccattaagaaagctgaagatcgtgatttgttt
aagcaggccatgaagaacattgggctaaagactccaccttcagggattgggaacactctt
gatgagtgtttcgacattgctgggagaattggtgagttccctttgattatccgtcctgcg
tttactttgggtggtactggtggtggaattgcctataacaaagaggagtttgagtccatt
tgtaaagccggtttggctgcgagtgtgacaagtcaggttcttgttgagaagtcgttgttg
ggttggaaagaatatgagcttgaggtgatgagagacttagctgacaatgttgtcattatc
tgttccattgagaacattgatcctatgggtgtgcatacgggtgattccattactgtggcg
cctgcacagacccttacggatagggagtaccagcggcttagggattattccattgccatt
ataagggagattggtgttgagtgtggtggatctaatgtgcagtttgcagttaaccccgtt
gatggtgaagttatgatcatagagatgaaccctagggtctcgagatcttctgctcttgct
tccaaggctacagggtttcccattgctaaaatggcagccaagttgtctgttggttatacc
ttggatcagattcctaatgatatcaccaggaaaacaccagctagcttcgagccctccatc
gattatgtggtgactaagattcctagattcgcatttgaaaagtttccaggatctcagccc
ttgctaacgacccagatgaaatctgtgggggaatctatggctctcggccgcacattccaa
gaatctttccagaaagctctgaggtctctggagtctggattctcaggttggggttgtgca
aaaatcaaagagctagattgggactgggatcagcttaaatacagccttagagtcccaaat
ccggacaggatccatgcgatatatgctgccatgaaaaagggcatgaagattgatgaaatc
tacgagttgagcatggtagacaagtggttcctaacccagcttaaagagcttgtggacgtg
gaacagtatcttatgtgcggaaccttgtcagagattacaaaagaagacctttacgaagtc
aaaaagcggggatttagtgacaagcaaatcgcttatgctacaaagacaacagaagaagaa
gtccgtacaaagcggatttctttaggagttgttccatcttacaagagagttgatacatgt
gcagcagagttcgaagcgcatacaccatacatgtactcttcgtatgattttgaatgtgaa
tcagctccaaacagcaagaagaaggttttgattttgggtggagggccaaatcgtattggt
caagggattgaatttgattactgttgttgccacacatctttcgccttacaggatgctgga
tatgagaccataatgttgaactcaaatcctgaaacagtatccacagattatgatacaagc
gataggctctactttgaacctcttacaatcgaggatgttctcaatgttattgatcttgaa
aaacctgatggaataatagtgcaatttggtggtcaaactcctctgaaacttgctctccca
atcaaacgttatttggataagcacatgcccatgagtttgagcggagagggacctgttcgc
atctggggtacatcacctgactccattgatgctgctgaagacagagagaggtttaatgca
attcttgatgagctgaaaattgagcaacccaagggaggcattgcaaagagcgaagctgat
gccttagcgattgcgaaggaggttggctacccagttgtggtaagaccttcttatgttcta
ggtggacgggcaatggagatcgtttatgatgacagtagattaataacgtatttggaaaat
gcggttgaagttgacccagagagacctgttttggtagataaatatctctctgatgccatt
gagatcgacgttgatacccttactgattcctatggaaatgtggtgattggtggaataatg
gagcatatcgaacaagctggtgtgcattctggtgactcggcttgtatgcttccaacacaa
actatcccatcttcttgtttacaaactatccgttcatggaccactaagctggcgaagaag
ctaaatgtatgtgggctgatgaattgtcagtatgcgatcacgacatctggggatgttttc
ttgcttgaagccaatccccgagcttcccgtactgtcccttttgtctcgaaagccattgga
catccgcttgccaagtatgctgcactggtcatgtcaggcaaatctctcaaagacattaac
tttgaaaaagaagtcatccctaaacacatctctgtcaaagaagctgttttcccatttgag
aagttccaaggatgtgatgtgatactcgggccagagatgagaagcacaggagaagtgatg
agcatcagttctgaattttcaagtgcgtttgcaatggctcagatcgctgcaggtcaaaag
ctacctttaactgggacagtcttcctcagcttaaacgatatgaccaaatcgcacctagag
aaaatcgcggtgtccttcctcgagctcgggttcaagatcgttgccacctcgggaacagct
cattttctggacctgaaaggcattgccgtggagaaagtgctgaagttgcatgaaggaaga
ccacatgctgctgatatggtggctaatggtcagatccagttgatgttgatcacaagctcg
ggagatgctcttgaccagaaagatgggagagagctcagacaaatggctctagcctacaag
gtccctgttataaccacggtggctggagcattagcgactgccgagggaatcaagagcttg
aagtcaagtgccattaaaatgaccgctctgcaggacttctttgaggtaaaggatgtatct
tctttgcccgtctga
DBGET
integrated database retrieval system
